RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TNFSF15O95150 251 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 TOMM40O96008 361 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 ALDOBP05062 364 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 BCHEP06276 602 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 HNRNPA1P09651 372 aaKnown RBP eCLIP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 TBC1D3HP0C7X1 549 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 MGMTP16455 207 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 MST1P26927 711 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 NNMTP40261 264 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 MEOX1P50221 254 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 LBX1P52954 281 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 STXBP1P61764 594 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 YPEL5P62699 121 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 RBPJQ06330 500 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 CDH18Q13634 790 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 PCOLCEQ15113 449 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 RAB35Q15286 201 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 NPY5RQ15761 445 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 SPDYE7PQ495Y7 208 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 XKR6Q5GH73 641 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 TMEM255AQ5JRV8 349 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 IDNKQ5T6J7 187 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 KIAA0930Q6ICG6 404 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 OR4F3Q6IEY1 312 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 FAM71E1Q6IPT2 247 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 APOBEC3HQ6NTF7 200 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 TRMT10BQ6PF06 316 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 TBPL2Q6SJ96 375 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 NUFIP2Q7Z417 695 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 PARGQ86W56 976 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 RIMKLAQ8IXN7 391 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 HIST3H2BBQ8N257 126 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 JAGN1Q8N5M9 183 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 C11orf42Q8N5U0 333 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 FAM86B1Q8N7N1 296 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 SAMD12Q8N8I0 201 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 PI4KAP1Q8N8J0 262 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 FBXL13Q8NEE6 735 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 OR7G2Q8NG99 324 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 OR4E2Q8NGC2 313 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 OR5L1Q8NGL2 311 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 OR5M3Q8NGP4 307 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 ZCCHC10Q8TBK6 192 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 RLN3Q8WXF3 142 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 RGP1Q92546 391 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 PYCR2Q96C36 320 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 RPUSD4Q96CM3 377 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 NEIL1Q96FI4 390 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 EEF2KMTQ96G04 330 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 TECTBQ96PL2 329 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 OR5B2Q96R09 309 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 OR52E6Q96RD3 313 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 SOSTQ9BQB4 213 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 CCDC3Q9BQI4 270 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 SULT4A1Q9BR01 284 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 NAA11Q9BSU3 229 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 RIOK2Q9BVS4 552 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 OR51E2Q9H255 320 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 DHX35Q9H5Z1 703 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 NOX3Q9HBY0 568 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 SLC25A19Q9HC21 320 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 EXOSC3Q9NQT5 275 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 UBQLN4Q9NRR5 601 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 SIRT3Q9NTG7 399 aaPredicted RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 MRPS18AQ9NVS2 196 aaKnown RBP5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 CD84Q9UIB8 345 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 FBXL3Q9UKT7 428 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 DAPP1Q9UN19 280 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 TNFRSF18Q9Y5U5 241 aa5.45□□□□□ -1.54
ECHDC1-215ENST00000475319 KIR2DL5BA0A0G2JN68 375 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 LOC102723532A0A0G2JNH3 316 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 KIR2DL5BA0A0G2JPC4 375 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 A0A1W2PPV4 95 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 ZNF724A8MTY0 619 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 CXorf49A8MYA2 514 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 H3BNC9 293 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 UPK1AO00322 258 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 CXCR6O00574 342 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 OR7A17O14581 309 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 TLX3O43711 291 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 TLX2O43763 284 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 GALR3O60755 368 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 FZD7O75084 574 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 RBMXL2O75526 392 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 YIF1AO95070 293 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 KCNK5O95279 499 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 HIST1H2ABP04908 130 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 C1QTNF9P0C862 333 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 CSNK2A2P19784 350 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 CXCL3P19876 107 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 CPT2P23786 658 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 ACKR3P25106 362 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 AVPR2P30518 371 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 ARL3P36405 182 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 IDH2P48735 452 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 TNFSF10P50591 281 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 CCR8P51685 355 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 CRISP1P54107 249 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 CDKN2DP55273 166 aa5.44□□□□□ -1.54
ECHDC1-215ENST00000475319 MXD1Q05195 221 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms