RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ASIC5Q9NY37 505 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 CALML5Q9NZT1 146 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 TMEM216Q9P0N5 145 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 ZNF346Q9UL40 294 aaKnown RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 RCE1Q9Y256 329 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 RASD1Q9Y272 281 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 WDR45Q9Y484 360 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 MPDZO75970 2070 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 NINQ8N4C6 2090 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 DSCAMO60469 2012 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 NCKAP5O14513 1909 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 USF3Q68DE3 2245 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ARPC4-TTLL3A0A0A6YYG9 625 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 IGHV3-15A0A0B4J1V0 119 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 A0A0G2JMP0 313 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 A0A0X1KG70 313 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 A0A1W2PPL8 197 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 SLC22A23A1A5C7 686 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 CFAP73A6NFT4 308 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 AQP7P3A6NL99 342 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 A8MVM7 634 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 FAM157AC9JC47 383 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ATP6V1G2-DDX39BF2Z307 99 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 G3V2L1 256 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 TRIM77I1YAP6 450 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 M0R233 179 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 PDLIM1O00151 329 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 PIP5K1BO14986 540 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 SPRY1O43609 319 aaPredicted RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 OR2T1O43869 369 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 GPRIN2O60269 458 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 NDUFS7O75251 213 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 NME6O75414 186 aaPredicted RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 SKAP2O75563 359 aaPredicted RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 UGT2B17O75795 530 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 H6PDO95479 791 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 C6orf47O95873 294 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 OPN1LWP04000 364 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 DBIP07108 87 aaKnown RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 FGF4P08620 206 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ITGA5P08648 1049 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 TACSTD2P09758 323 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 OR4A8P0C604 315 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 DAOP14920 347 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 CREB1P16220 341 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 IL7RP16871 459 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 RHCEP18577 417 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 NPR2P20594 1047 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 MATN1P21941 496 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ACHEP22303 614 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 UQCRC2P22695 453 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 CXCR1P25024 350 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 SHC1P29353 583 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 PGM1P36871 562 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 COMPP49747 757 aaPredicted RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 ZNF81P51508 661 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 OR2B6P58173 313 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 SELENOVP59797 346 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 RPS16P62249 146 aaKnown RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 KCNJ10P78508 379 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 MRPS11P82912 194 aaKnown RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 H3F3AP84243 136 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 GALK2Q01415 458 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 RUNX1T1Q06455 604 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 PTGR1Q14914 329 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 MFSD13AQ14CX5 517 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 LARS2Q15031 903 aaKnown RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 TSC22D1Q15714 1073 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 GPR68Q15743 365 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 MOGQ16653 247 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 PCGF3Q3KNV8 242 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 SLC9B1Q4ZJI4 515 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 LIN52Q52LA3 116 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 PLA1AQ53H76 456 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 XKR7Q5GH72 579 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.03□□□□□ -1.92
XRN1-209ENST00000472625 OTUD3Q5T2D3 398 aaPredicted RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 UBAP2Q5T6F2 1119 aaKnown RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 RNF220Q5VTB9 566 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 PRAMEF8Q5VWM4 474 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 PRAMEF7Q5VXH5 474 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 AP1ARQ63HQ0 302 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 CLEC6AQ6EIG7 209 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 SFRP4Q6FHJ7 346 aaPredicted RBP3.03□□□□□ -1.92
XRN1-209ENST00000472625 ANKRD26P1Q6NSI1 321 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ANKRD16Q6P6B7 361 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 EMBQ6PCB8 327 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 UNQ6126/PRO20091Q6UXV3 157 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 DEF8Q6ZN54 512 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 AAED1Q7RTV5 226 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 C1QL2Q7Z5L3 287 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 SPATA19Q7Z5L4 167 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 DPPA2Q7Z7J5 298 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 GPAT4Q86UL3 456 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 PEX5LQ8IYB4 626 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 ZNF786Q8N393 782 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 C3orf56Q8N813 242 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 OR4M2Q8NGB6 313 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 OR9K2Q8NGE7 335 aa3.03□□□□□ -1.92
XRN1-209ENST00000472625 OR8J2Q8NGG1 315 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms