RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ACADSP16219 412 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 GSSP48637 474 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 NR1H2P55055 460 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 CLRN1P58418 232 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 GABPB1Q06547 395 aaPredicted RBP13.28□□□□□ -0.28
SNX13-205ENST00000471744 PPA1Q15181 289 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 TAB1Q15750 504 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 MICAQ29983 383 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 BEX5Q5H9J7 111 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 ARMC4Q5T2S8 1044 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 GPR139Q6DWJ6 353 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 PGBD2Q6P3X8 592 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 ANKRD16Q6P6B7 361 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 SMARCD3Q6STE5 483 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 CCDC36Q8IYA8 594 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 C10orf67Q8IYJ2 551 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 NOXO1Q8NFA2 376 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 OR1K1Q8NGR3 316 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 MAGEE2Q8TD90 523 aaPredicted RBP13.28□□□□□ -0.28
SNX13-205ENST00000471744 TMEM54Q969K7 222 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 DUS3LQ96G46 650 aaKnown RBP13.28□□□□□ -0.28
SNX13-205ENST00000471744 GPX7Q96SL4 187 aaPredicted RBP13.28□□□□□ -0.28
SNX13-205ENST00000471744 ALG12Q9BV10 488 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 SPG11Q96JI7 2443 aa13.28□□□□□ -0.28
SNX13-205ENST00000471744 ZNF99A8MXY4 864 aaPredicted RBP13.27□□□□□ -0.29
SNX13-205ENST00000471744 E2F6O75461 281 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 CTAG2O75638 210 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 WNT11O96014 354 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 THBDP07204 575 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 FCGR1AP12314 374 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 GSTM3P21266 225 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 ARHGDIAP52565 204 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 FOXG1P55316 489 aaPredicted RBP13.27□□□□□ -0.29
SNX13-205ENST00000471744 LGALS3BPQ08380 585 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 TOP3AQ13472 1001 aaPredicted RBP13.27□□□□□ -0.29
SNX13-205ENST00000471744 CEACAM16Q2WEN9 425 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 C9orf135Q5VTT2 229 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 FBXW10Q5XX13 1052 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 ZNF770Q6IQ21 691 aaPredicted RBP13.27□□□□□ -0.29
SNX13-205ENST00000471744 DPY19L2P2Q6ZN68 376 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 LINGO2Q7L985 606 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 TMEM200AQ86VY9 491 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 WFDC8Q8IUA0 241 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 FANK1Q8TC84 345 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 GIPC3Q8TF64 312 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 UTP4Q969X6 686 aaKnown RBP13.27□□□□□ -0.29
SNX13-205ENST00000471744 KATNB1Q9BVA0 655 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 DGCR6LQ9BY27 220 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 MRPL13Q9BYD1 178 aaKnown RBP13.27□□□□□ -0.29
SNX13-205ENST00000471744 SLC17A5Q9NRA2 495 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 RASSF1Q9NS23 344 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 ARMC1Q9NVT9 282 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 GRHPRQ9UBQ7 328 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 MGAT4BQ9UQ53 548 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 POFUT2Q9Y2G5 429 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 U3KQV3 271 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 NAV2Q8IVL1 2488 aa13.27□□□□□ -0.29
SNX13-205ENST00000471744 XKRYO14609 159 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 AHCYL1O43865 530 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 TRMUO75648 421 aaKnown RBP13.26□□□□□ -0.29
SNX13-205ENST00000471744 APEHP13798 732 aaKnown RBP13.26□□□□□ -0.29
SNX13-205ENST00000471744 CDH2P19022 906 aaPredicted RBP13.26□□□□□ -0.29
SNX13-205ENST00000471744 SLC6A6P31641 620 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 ACVR1BP36896 505 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 ERFP50548 548 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 RPS6KA3P51812 740 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 UBE2NP61088 152 aaKnown RBP13.26□□□□□ -0.29
SNX13-205ENST00000471744 ARF1P84077 181 aaKnown RBP13.26□□□□□ -0.29
SNX13-205ENST00000471744 CCNIQ14094 377 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 HIST3H3Q16695 136 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 TBRG1Q3YBR2 411 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 C22orf34Q6ZV56 151 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 ZNF627Q7L945 461 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 IGFN1Q86VF2 1251 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 ARIH2OSQ8N7S6 290 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 AQP11Q8NBQ7 271 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 OR10G2Q8NGC3 310 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 OR9Q2Q8NGE9 314 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 BCL2L2Q92843 193 aaPredicted RBP13.26□□□□□ -0.29
SNX13-205ENST00000471744 SLCO4A1Q96BD0 722 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 RBP7Q96R05 134 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 GPA33Q99795 319 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 OR52D1Q9H346 318 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 ESRP2Q9H6T0 727 aaKnown RBP13.26□□□□□ -0.29
SNX13-205ENST00000471744 SMURF2Q9HAU4 748 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 NRIP3Q9NQ35 241 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 VNN3Q9NY84 501 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 ZNF346Q9UL40 294 aaKnown RBP13.26□□□□□ -0.29
SNX13-205ENST00000471744 AP4S1Q9Y587 144 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 SLC25A15Q9Y619 301 aa13.26□□□□□ -0.29
SNX13-205ENST00000471744 PLCE1Q9P212 2302 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 ARPC4-TTLL3A0A0A6YYG9 625 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 DEFB108AA8MXU0 73 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 DHHO43323 396 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 MGRN1O60291 552 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 HRGP04196 525 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 PRF1P14222 555 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 SDHAP31040 664 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 ZNF84P51523 738 aa13.25□□□□□ -0.29
SNX13-205ENST00000471744 ZNF133P52736 654 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms