RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 FAM78AQ5JUQ0 283 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 C10orf120Q5SQS8 335 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 C1orf220Q5T0J3 134 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 GALNT17Q6IS24 598 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF493Q6ZR52 646 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 STRADAQ7RTN6 431 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 BHLHA15Q7RTS1 189 aaPredicted RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 PLA2G4DQ86XP0 818 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF573Q86YE8 665 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 CCDC50Q8IVM0 306 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 PIANPQ8IYJ0 282 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 SLC38A6Q8IZM9 456 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 MREGQ8N565 214 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 GATSQ8NAP1 163 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 SYT14Q8NB59 555 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 OR52H1Q8NGJ2 320 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 SDR42E1Q8WUS8 393 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 ZCCHC13Q8WW36 166 aaKnown RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 CTNNBL1Q8WYA6 563 aaPredicted RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 CCDC47Q96A33 483 aaKnown RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 SGK3Q96BR1 496 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 EFHD2Q96C19 240 aaPredicted RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 TM4SF18Q96CE8 201 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 RNF157Q96PX1 679 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 CLCC1Q96S66 551 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF382Q96SR6 550 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 DOK1Q99704 481 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 C1orf21Q9H246 121 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 DBNDD1Q9H9R9 158 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 MRPL47Q9HD33 250 aaKnown RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 HMG20AQ9NP66 347 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 RAB18Q9NP72 206 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 GPATCH2LQ9NWQ4 482 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 HOOK1Q9UJC3 728 aaKnown RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 PACSIN2Q9UNF0 486 aaPredicted RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 KCNIP3Q9Y2W7 256 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 SIGLEC9Q9Y336 463 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 OR10H1Q9Y4A9 318 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 TIMM10BQ9Y5J6 103 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 FLNBO75369 2602 aaKnown RBP0.59□□□□□ -2.32
UBXN4-207ENST00000471246 NID2Q14112 1375 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 CEMIPQ8WUJ3 1361 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 PTPRTO14522 1441 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 TRIP11Q15643 1979 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 NCOR2Q9Y618 2525 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 CHD6Q8TD26 2715 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 OR5B21A6NL26 309 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 A8MUI8 341 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 VGLL3A8MV65 326 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 HSD17B6O14756 317 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 KMOO15229 486 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 POLR2DO15514 142 aaKnown RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 CHST1O43916 411 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 PRPSAP2O60256 369 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 RAMP3O60896 148 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 GABARAPO95166 117 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 CCNE2O96020 404 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 FABP3P05413 133 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 BCHEP06276 602 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 OR56A5P0C7T3 313 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 C1GALT1C1LP0DN25 315 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 TCN1P20061 433 aaPredicted RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 PAX7P23759 505 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 MAPK3P27361 379 aaPredicted RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 RORAP35398 523 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 RPL13AP40429 203 aaKnown RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 GPR6P46095 362 aaPredicted RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 NPBWR2P48146 333 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 CCR8P51685 355 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 RPS21P63220 83 aaKnown RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 KLRB1Q12918 225 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 SELPLGQ14242 412 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 GANABQ14697 944 aaKnown RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 PON3Q15166 354 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 POU2AF1Q16633 256 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 TATDN3Q17R31 274 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 USH1GQ495M9 461 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 DMRTC1Q5HYR2 192 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 SPIN3Q5JUX0 258 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 TMEM225Q6GV28 225 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 CEMP1Q6PRD7 247 aaPredicted RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 KDM7AQ6ZMT4 941 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 UTS2BQ765I0 119 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 LRRC52Q8N7C0 313 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 NECAP1Q8NC96 275 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 MAIP1Q8WWC4 291 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 NARS2Q96I59 477 aaKnown RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 TGM7Q96PF1 710 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 CCT7Q99832 543 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 OSBPL10Q9BXB5 764 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 TEKT3Q9BXF9 490 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF717Q9BY31 904 aaPredicted RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 MRPL37Q9BZE1 423 aaKnown RBP0.58□□□□□ -2.32
UBXN4-207ENST00000471246 LRRN3Q9H3W5 708 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 SYNDIG1Q9H7V2 258 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 YY1AP1Q9H869 796 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 ADAP2Q9NPF8 381 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 ISYNA1Q9NPH2 558 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 UFSP2Q9NUQ7 469 aa0.58□□□□□ -2.32
UBXN4-207ENST00000471246 EXD2Q9NVH0 621 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms