RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 SOHLH2Q9NX45 425 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 PYCARD-AS1I3L0S3 204 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 GP1BAP07359 652 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 UBBP0CG47 229 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 UBCP0CG48 685 aaKnown RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 MGMTP16455 207 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 GCGRP47871 477 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 RPS27AP62979 156 aaKnown RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 UBA52P62987 128 aaKnown RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 AMZ1Q400G9 498 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 DCAF12L2Q5VW00 463 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 DNAAF1Q8NEP3 725 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 DMBX1Q8NFW5 382 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 SFXN5Q8TD22 340 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 ACOT11Q8WXI4 607 aaPredicted RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 NR4A3Q92570 626 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 HCAR1Q9BXC0 346 aa12.66□□□□□ -0.38
GPC1-208ENST00000469694 GPN3Q9UHW5 284 aaPredicted RBP12.66□□□□□ -0.38
GPC1-208ENST00000469694 SPP1P10451 314 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 ZNF10P21506 573 aaPredicted RBP12.65□□□□□ -0.38
GPC1-208ENST00000469694 DCTDP32321 178 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 TRHRP34981 398 aaPredicted RBP12.65□□□□□ -0.38
GPC1-208ENST00000469694 HNRNPKP61978 463 aaKnown RBP eCLIP12.65□□□□□ -0.38
GPC1-208ENST00000469694 DUSP5Q16690 384 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 PRAMEF17Q5VTA0 474 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 DHRS7BQ6IAN0 325 aaPredicted RBP12.65□□□□□ -0.38
GPC1-208ENST00000469694 MFSD12Q6NUT3 480 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 UQCC3Q6UW78 93 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 USP53Q70EK8 1073 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 OVCH1Q7RTY7 1134 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 CBLN2Q8IUK8 224 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 NRMQ8IXM6 262 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 GJD3Q8N144 294 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 TMEM185AQ8NFB2 350 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 OR2AK2Q8NG84 335 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 ADAMTS15Q8TE58 950 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 SLC25A28Q96A46 364 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 CLDN23Q96B33 292 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 PEX11GQ96HA9 241 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 SPACA7Q96KW9 195 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 GSN-AS1Q9NRJ2 163 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 FBXO34Q9NWN3 711 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 TMEM218A2RU14 115 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 LMO7DNF2Z398 122 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 BCAT2O15382 392 aaPredicted RBP12.65□□□□□ -0.38
GPC1-208ENST00000469694 FMO6PO60774 539 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 ARL6IP5O75915 188 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 ACHEP22303 614 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 OR1D5P58170 312 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 DCDP81605 110 aaKnown RBP12.65□□□□□ -0.38
GPC1-208ENST00000469694 DECR1Q16698 335 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 PRPF38BQ5VTL8 546 aaKnown RBP12.65□□□□□ -0.38
GPC1-208ENST00000469694 OR5J2Q8NH18 312 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 DERL3Q96Q80 235 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 ACTRT3Q9BYD9 372 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 PIGMQ9H3S5 423 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 TAS2R10Q9NYW0 307 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 UNC13CQ8NB66 2214 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 SEC16AO15027 2179 aa12.65□□□□□ -0.38
GPC1-208ENST00000469694 NPIPA5A0A0B4J1W7 369 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 A0A0G2JPF8 293 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 CDHR4A6H8M9 788 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 HNRNPCL3B7ZW38 293 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 NPIPA7E9PJI5 369 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 HRKO00198 91 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 CDC42EP2O14613 210 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 GOSR2O14653 212 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 PIAS2O75928 621 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 NPIPA8P0DM63 369 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 HNRNPCL4P0DMR1 293 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 NOS3P29474 1203 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 PYCR1P32322 319 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 PTH2RP49190 550 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 STARP49675 285 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 ZNF85Q03923 595 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 GUCA2BQ16661 112 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 SLC25A45Q8N413 288 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 ARHGEF39Q8N4T4 335 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 OR6S1Q8NH40 331 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 SMAP2Q8WU79 429 aaPredicted RBP12.64□□□□□ -0.39
GPC1-208ENST00000469694 LRIT1Q9P2V4 623 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 ST6GALNAC2Q9UJ37 374 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 TMEM184BQ9Y519 407 aaPredicted RBP12.64□□□□□ -0.39
GPC1-208ENST00000469694 ARID1BQ8NFD5 2236 aaPredicted RBP12.64□□□□□ -0.39
GPC1-208ENST00000469694 TGFBR3LH3BV60 316 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 SGCEO43556 437 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 FOXS1O43638 330 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 PIP5K1CO60331 668 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 ZGLP1P0C6A0 271 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 FUT1P19526 365 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 SORDQ00796 357 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 ZNF311Q5JNZ3 666 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 MANEAQ5SRI9 462 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 OR2L13Q8N349 312 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 C2CD4CQ8TF44 421 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 SLC25A38Q96DW6 304 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 MS4A4EQ96PG1 132 aa12.64□□□□□ -0.39
GPC1-208ENST00000469694 LYRM4Q9HD34 91 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms