RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 PGA3P0DJD8 388 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 FCGR1AP12314 374 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 ACADSP16219 412 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 CDH2P19022 906 aaPredicted RBP10.5□□□□□ -0.73
VPS13D-204ENST00000469054 GSTM3P21266 225 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 ARHGDIAP52565 204 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 ERVK-25P63136 954 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 DAZAP2Q15038 168 aaPredicted RBP10.5□□□□□ -0.73
VPS13D-204ENST00000469054 TAB1Q15750 504 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 STK11Q15831 433 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 ATP6AP1Q15904 470 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 CEACAM16Q2WEN9 425 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 TIMM23BQ5SRD1 257 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 DMRTA1Q5VZB9 504 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 FAM205BPQ63HN1 556 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 LRFN4Q6PJG9 635 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 THSD4Q6ZMP0 1018 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 DPY19L2P2Q6ZN68 376 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 P2RY8Q86VZ1 359 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 C10orf67Q8IYJ2 551 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF295-AS1Q8N0V1 137 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 C1orf162Q8NEQ5 155 aaPredicted RBP10.5□□□□□ -0.73
VPS13D-204ENST00000469054 FANK1Q8TC84 345 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 HDAC2Q92769 488 aaKnown RBP10.5□□□□□ -0.73
VPS13D-204ENST00000469054 NRBF2Q96F24 287 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 C14orf79Q96F83 325 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 ZC3HAV1LQ96H79 300 aaKnown RBP10.5□□□□□ -0.73
VPS13D-204ENST00000469054 BOD1Q96IK1 185 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 TSPAN32Q96QS1 320 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 BDH2Q9BUT1 245 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 ULBP2Q9BZM5 246 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 NRIP3Q9NQ35 241 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 PDP1Q9P0J1 537 aaPredicted RBP10.5□□□□□ -0.73
VPS13D-204ENST00000469054 GRHPRQ9UBQ7 328 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 IL20RAQ9UHF4 553 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 A6NIZ1 184 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 OR5H1A6NKK0 313 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF99A8MXY4 864 aaPredicted RBP10.49□□□□□ -0.73
VPS13D-204ENST00000469054 APEHP13798 732 aaKnown RBP10.49□□□□□ -0.73
VPS13D-204ENST00000469054 CRYGSP22914 178 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 SLC6A6P31641 620 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ACVR1BP36896 505 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 RPS6KA3P51812 740 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 SH3BGRP55822 239 aaPredicted RBP10.49□□□□□ -0.73
VPS13D-204ENST00000469054 CLRN1P58418 232 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 RAP1BP61224 184 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 RAP1AP62834 184 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ARF1P84077 181 aaKnown RBP10.49□□□□□ -0.73
VPS13D-204ENST00000469054 COX10Q12887 443 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 GPR139Q6DWJ6 353 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 RPL13AP3Q6NVV1 102 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ZFP1Q6P2D0 407 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 SHQ1Q6PI26 577 aaKnown RBP10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF620Q6ZNG0 422 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 RASSF6Q6ZTQ3 369 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 SSX8Q7RTT4 187 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 FAM122BQ7Z309 247 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 AMIGO2Q86SJ2 522 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 HS3ST5Q8IZT8 346 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 C17orf78Q8N4C9 275 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ARIH2OSQ8N7S6 290 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 SYT14Q8NB59 555 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 OR1K1Q8NGR3 316 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF519Q8TB69 540 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 PYDC1Q8WXC3 89 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 LRTOMTQ8WZ04 291 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 MCHR2Q969V1 340 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 GTPBP3Q969Y2 492 aaKnown RBP10.49□□□□□ -0.73
VPS13D-204ENST00000469054 MUCL1Q96DR8 90 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF837Q96EG3 531 aaPredicted RBP10.49□□□□□ -0.73
VPS13D-204ENST00000469054 SAMD8Q96LT4 415 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 Q96M85 177 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 FEVQ99581 238 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 NIPSNAP1Q9BPW8 284 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ALG12Q9BV10 488 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 IL20Q9NYY1 176 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ADAM18Q9Y3Q7 739 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 CDH10Q9Y6N8 788 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 HCFC1P51610 2035 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 FREM1Q5H8C1 2179 aa10.49□□□□□ -0.73
VPS13D-204ENST00000469054 ALPK2Q86TB3 2170 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 A6NNC1 897 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 XKRYO14609 159 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 QDPRP09417 244 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 NR2C1P13056 603 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 ANXA8P13928 327 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 PRKACGP22612 351 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 SDHAP31040 664 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 HOXC12P31275 282 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 PPA1Q15181 289 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 HIST3H3Q16695 136 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 TBRG1Q3YBR2 411 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 C1QTNF12Q5T7M4 302 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 ANKRD16Q6P6B7 361 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 CD300LDQ6UXZ3 194 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 WFDC8Q8IUA0 241 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 CLDN22Q8N7P3 220 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 WDR31Q8NA23 367 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 NOXO1Q8NFA2 376 aa10.48□□□□□ -0.73
VPS13D-204ENST00000469054 OR52N5Q8NH56 324 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms