RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 ZNF566Q969W8 418 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 LRRC58Q96CX6 371 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 MPP4Q96JB8 637 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 BEX2Q9BXY8 128 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 FGFR1OP2Q9NVK5 253 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 TAS2R5Q9NYW4 299 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 GLTPQ9NZD2 209 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 ZNF229Q9UJW7 825 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 FBXO9Q9UK97 447 aaPredicted RBP18.83■□□□□ 0.6
TTC28-204ENST00000468807 CMAHPQ9Y471 501 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 SPEF1Q9Y4P9 236 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 VWC2LB2RUY7 222 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 MRASO14807 208 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 SHOX2O60902 331 aaPredicted RBP18.82■□□□□ 0.6
TTC28-204ENST00000468807 APEHP13798 732 aaKnown RBP18.82■□□□□ 0.6
TTC28-204ENST00000468807 TNFRSF1BP20333 461 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 GIPRP48546 466 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 GZMKP49863 264 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 CRYBA2P53672 197 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 TAS2R41P59536 307 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 RAB1AP62820 205 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 REP15Q6BDI9 236 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 DEF8Q6ZN54 512 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 CARM1Q86X55 608 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 DOK1Q99704 481 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 SLC19A3Q9BZV2 496 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 BPESC1Q9GZL8 116 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 CHODLQ9H9P2 273 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 MALRD1Q5VYJ5 2156 aa18.82■□□□□ 0.6
TTC28-204ENST00000468807 IGHV4-61A0A0C4DH41 118 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 BLOC1S5-TXNDC5H3BN57 136 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 UBL3O95164 117 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 PATE4P0C8F1 98 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 DAOP14920 347 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 ZNF14P17017 642 aaPredicted RBP18.81■□□□□ 0.6
TTC28-204ENST00000468807 NR4A1P22736 598 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 GALK2Q01415 458 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 ZP4Q12836 540 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 KLF10Q13118 480 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 CCDC80Q76M96 950 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 ZNF627Q7L945 461 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 OR8J3Q8NGG0 315 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 TMEM54Q969K7 222 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 PCDHAC1Q9H158 963 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 TPK1Q9H3S4 243 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 ZNF224Q9NZL3 707 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 BAG5Q9UL15 447 aa18.81■□□□□ 0.6
TTC28-204ENST00000468807 LOC100653049A0A140TA62 436 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 LOC100289279A0A1B0GTE1 492 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 TMEM129A0AVI4 362 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 FXYD1O00168 92 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 KRT34O76011 436 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 ADRA2AP08913 450 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 RAB39AQ14964 217 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 MAPRE2Q15555 327 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 LRRC23Q53EV4 343 aaPredicted RBP18.8■□□□□ 0.6
TTC28-204ENST00000468807 PIWIL3Q7Z3Z3 882 aaKnown RBP18.8■□□□□ 0.6
TTC28-204ENST00000468807 SLC22A24Q8N4F4 322 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 ZNF540Q8NDQ6 660 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 NEU4Q8WWR8 484 aaPredicted RBP18.8■□□□□ 0.6
TTC28-204ENST00000468807 SLC25A44Q96H78 314 aaPredicted RBP18.8■□□□□ 0.6
TTC28-204ENST00000468807 PRSS27Q9BQR3 290 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 ZNF426Q9BUY5 554 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 SHARPINQ9H0F6 387 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 MRGBPQ9NV56 204 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 KCNS2Q9ULS6 477 aa18.8■□□□□ 0.6
TTC28-204ENST00000468807 RNF212BA8MTL3 300 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 BBIP1A8MTZ0 92 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 MCIDASD6RGH6 385 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 LMX1BO60663 402 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 STAMBPO95630 424 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 BCL10O95999 233 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 ASAH2BP0C7U1 165 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 FAM157CP0CG43 387 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 LSP1P33241 339 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 CLRN1P58418 232 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 CALHM3Q86XJ0 350 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 NKAIN4Q8IVV8 208 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 SKA3Q8IX90 412 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 ARIH2OSQ8N7S6 290 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 PFN4Q8NHR9 129 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 TMEM255BQ8WV15 326 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 MRPL24Q96A35 216 aaKnown RBP18.79■□□□□ 0.6
TTC28-204ENST00000468807 ZNF75AQ96N20 296 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 SH3GL3Q99963 347 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 SYT3Q9BQG1 590 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 MRPL37Q9BZE1 423 aaKnown RBP18.79■□□□□ 0.6
TTC28-204ENST00000468807 MEPEQ9NQ76 525 aaPredicted RBP18.79■□□□□ 0.6
TTC28-204ENST00000468807 SAR1AQ9NR31 198 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 FZR1Q9UM11 496 aa18.79■□□□□ 0.6
TTC28-204ENST00000468807 A0A1W2PRG6 482 aa18.78■□□□□ 0.6
TTC28-204ENST00000468807 FARS2O95363 451 aaKnown RBP18.78■□□□□ 0.6
TTC28-204ENST00000468807 IFNA14P01570 189 aa18.78■□□□□ 0.6
TTC28-204ENST00000468807 IGHG1P01857 330 aa18.78■□□□□ 0.6
TTC28-204ENST00000468807 MT-ND1P03886 318 aa18.78■□□□□ 0.6
TTC28-204ENST00000468807 F13BP05160 661 aa18.78■□□□□ 0.6
TTC28-204ENST00000468807 QDPRP09417 244 aa18.78■□□□□ 0.6
TTC28-204ENST00000468807 OR8G3PP0DMU2 310 aa18.78■□□□□ 0.6
TTC28-204ENST00000468807 ZNF35P13682 527 aa18.78■□□□□ 0.6
TTC28-204ENST00000468807 OR1E2P47887 323 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms