RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PGGHGQ32M88 737 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 CARD17Q5XLA6 110 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 BEND4Q6ZU67 534 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 C20orf196Q8IYI0 205 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 UBE2J2Q8N2K1 259 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 GPR137CQ8N3F9 429 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 ZNF610Q8N9Z0 462 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 RELL2Q8NC24 303 aaPredicted RBP13.45□□□□□ -0.26
SNIP1-202ENST00000468040 NOXO1Q8NFA2 376 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 OR6N1Q8NGY5 312 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 OR4Q3Q8NH05 313 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 ITLN2Q8WWU7 325 aaPredicted RBP13.45□□□□□ -0.26
SNIP1-202ENST00000468040 ALG12Q9BV10 488 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 MRPL13Q9BYD1 178 aaKnown RBP13.45□□□□□ -0.26
SNIP1-202ENST00000468040 PRRG3Q9BZD7 231 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 OPN3Q9H1Y3 402 aaPredicted RBP13.45□□□□□ -0.26
SNIP1-202ENST00000468040 VCX3BQ9H321 246 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 RIBC2Q9H4K1 309 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 SLC25A19Q9HC21 320 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 B3GAT2Q9NPZ5 323 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 JKAMPQ9P055 326 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 UPB1Q9UBR1 384 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 MALT1Q9UDY8 824 aa13.45□□□□□ -0.26
SNIP1-202ENST00000468040 A8MXE2 369 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 IFNGP01579 166 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 IGHV3-9P01782 118 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 HMGN1P05114 100 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 ASCL1P50553 236 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 CDK5Q00535 292 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 MYBPC1Q00872 1141 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 RUNX1T1Q06455 604 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 ITGADQ13349 1161 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 GINS1Q14691 196 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 PTGES3Q15185 160 aaKnown RBP13.44□□□□□ -0.26
SNIP1-202ENST00000468040 MESTQ5EB52 335 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 TSPO2Q5TGU0 170 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 Q6ZT83 130 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.44□□□□□ -0.26
SNIP1-202ENST00000468040 LUZP2Q86TE4 346 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 JAZF1Q86VZ6 243 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 GALNT4Q8N4A0 578 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 FAM26EQ8N5C1 309 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 HDAC2Q92769 488 aaKnown RBP13.44□□□□□ -0.26
SNIP1-202ENST00000468040 TMEM54Q969K7 222 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 RASD2Q96D21 266 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 LRRC46Q96FV0 321 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 KCNK17Q96T54 332 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 KCNJ16Q9NPI9 418 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 SLC7A10Q9NS82 523 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 ASB6Q9NWX5 421 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 SMPD3Q9NY59 655 aaPredicted RBP13.44□□□□□ -0.26
SNIP1-202ENST00000468040 GLTPQ9NZD2 209 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 PRSS50Q9UI38 385 aa13.44□□□□□ -0.26
SNIP1-202ENST00000468040 FOXD3Q9UJU5 478 aaPredicted RBP13.44□□□□□ -0.26
SNIP1-202ENST00000468040 HIVEP3Q5T1R4 2406 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 PRSS37A4D1T9 235 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 WIPF3A6NGB9 483 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 FAM90A27PA6NNH2 459 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 RIIAD1A6NNX1 92 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 ZAR1LA6NP61 321 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 ZNF587BE7ETH6 402 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 UPK3AO75631 287 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 CLDN14O95500 239 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 EDNRAP25101 427 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 CD47Q08722 323 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 P2RY6Q15077 328 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 HIST3H3Q16695 136 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 FBXL19-AS1Q494R0 122 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 SLC35F1Q5T1Q4 408 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 WDFY1Q8IWB7 410 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 INTS1Q8N201 2190 aaKnown RBP13.43□□□□□ -0.26
SNIP1-202ENST00000468040 IQCF1Q8N6M8 205 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 ALKBH3Q96Q83 286 aaPredicted RBP13.43□□□□□ -0.26
SNIP1-202ENST00000468040 SLC38A2Q96QD8 506 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 RBP7Q96R05 134 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 SNX18Q96RF0 628 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 ULBP2Q9BZM5 246 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 ELOVL5Q9NYP7 299 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 KLHL21Q9UJP4 597 aa13.43□□□□□ -0.26
SNIP1-202ENST00000468040 M0R3G1 203 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 SNAP29O95721 258 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 RENP00797 406 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 HIST1H1CP16403 213 aaKnown RBP13.42□□□□□ -0.26
SNIP1-202ENST00000468040 ZNF3P17036 446 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 PCYT1AP49585 367 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.42□□□□□ -0.26
SNIP1-202ENST00000468040 FAPQ12884 760 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 STK11Q15831 433 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 THEM4Q5T1C6 240 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 SLX4IPQ5VYV7 408 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 ACSM5Q6NUN0 579 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 ZNF474Q6S9Z5 364 aaPredicted RBP13.42□□□□□ -0.26
SNIP1-202ENST00000468040 GABRG1Q8N1C3 465 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 SYT14Q8NB59 555 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 OR52E2Q8NGJ4 325 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 OR4K13Q8NH42 304 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 SSC4DQ8WTU2 575 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 NRG4Q8WWG1 115 aa13.42□□□□□ -0.26
SNIP1-202ENST00000468040 RBM24Q9BX46 236 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms