RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 IGLV1-44P01699 117 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 IGHG1P01857 330 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 RAF1P04049 648 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 F13BP05160 661 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 SAGP10523 405 aaPredicted RBP8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 ACADSP16219 412 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 PTAFRP25105 342 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 GPR4P46093 362 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 CSNK1A1P48729 337 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 FXYD6P3P58550 94 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 PRPS1P60891 318 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 RPL27P61353 136 aaKnown RBP8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 ARF1P84077 181 aaKnown RBP8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 RUNX1T1Q06455 604 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 BSPH1Q075Z2 132 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 GK3PQ14409 553 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 NRN1LQ496H8 165 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 ZBED5Q49AG3 693 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 HIKESHIQ53FT3 197 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 ALG10Q5BKT4 473 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 FGD3Q5JSP0 725 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 C10orf128Q5T292 105 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 C9orf135Q5VTT2 229 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 FAM205BPQ63HN1 556 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 C20orf204Q6ZNR8 217 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 RRM2BQ7LG56 351 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 FAM122BQ7Z309 247 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 ZER1Q7Z7L7 766 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 OAFQ86UD1 273 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 ADGRG5Q8IZF4 528 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 OR4C15Q8NGM1 316 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 OR13C2Q8NGS9 318 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 OR52N5Q8NH56 324 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 ZNF519Q8TB69 540 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 ZNF566Q969W8 418 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 RADILQ96JH8 1075 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 TNFRSF13CQ96RJ3 184 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 GPA33Q99795 319 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 CADM1Q9BY67 442 aaKnown RBP8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 TRIM15Q9C019 465 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 MGAT4BQ9UQ53 548 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 SIGLEC7Q9Y286 467 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 RNF115Q9Y4L5 304 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 LYVE1Q9Y5Y7 322 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 CREBBPQ92793 2442 aa8.28□□□□□ -1.08
SDCCAG3-208ENST00000466579 HEATR1Q9H583 2144 aaKnown RBP8.27□□□□□ -1.08
SDCCAG3-208ENST00000466579 DSCAMO60469 2012 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 TRAV27A0A087WT01 109 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 TCRBV3S1A0A5B6 114 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 SHISA9B4DS77 424 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 HS3ST1O14792 307 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 AHCYL1O43865 530 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 MGRN1O60291 552 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 TMCC2O75069 709 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 SERPINI2O75830 405 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 IGKV3-15P01624 115 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 CD3EP07766 207 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 CD14P08571 375 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 RAP2AP10114 183 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 APEHP13798 732 aaKnown RBP8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 CD53P19397 219 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 FPR3P25089 353 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 CD40P25942 277 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 RRM2P31350 389 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 GSSP48637 474 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 RASSF2P50749 326 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 IST1P53990 364 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 SPIBQ01892 262 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 CHRNB3Q05901 458 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 FOXD4Q12950 439 aaPredicted RBP8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 MELKQ14680 651 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 FAM98BQ52LJ0 330 aaKnown RBP8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 CARD17Q5XLA6 110 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 FBXW10Q5XX13 1052 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 ZNF770Q6IQ21 691 aaPredicted RBP8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 C1orf94Q6P1W5 598 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 KLHL17Q6TDP4 642 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 TMEM108Q6UXF1 575 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 MEX3DQ86XN8 651 aaKnown RBP8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 LINC00471Q8N535 108 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 ZNF611Q8N823 705 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 NOXO1Q8NFA2 376 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 OR6N1Q8NGY5 312 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 OR52J3Q8NH60 311 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 OR51A7Q8NH64 312 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 FNDC8Q8TC99 324 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 HDAC2Q92769 488 aaKnown RBP8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 CCDC124Q96CT7 223 aaKnown RBP8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 FAM46AQ96IP4 442 aaKnown RBP8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 ALPK1Q96QP1 1244 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 TSPAN32Q96QS1 320 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 FOXC2Q99958 501 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 ALG12Q9BV10 488 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 ULBP2Q9BZM5 246 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 CXXC4Q9H2H0 198 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 LRMDAQ9H2I8 198 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 MMADHCQ9H3L0 296 aaPredicted RBP8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 SMURF2Q9HAU4 748 aa8.27□□□□□ -1.09
SDCCAG3-208ENST00000466579 KRCC1Q9NPI7 259 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms