RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 MAGEB1P43366 347 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 CRYBA2P53672 197 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 MTPNP58546 118 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 RAB1AP62820 205 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 LINC00114Q6XXX2 140 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 RETREG3Q86VR2 466 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 KRT73Q86Y46 540 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 HIPK4Q8NE63 616 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 VANGL1Q8TAA9 524 aaPredicted RBP17.66■□□□□ 0.42
COL6A1-203ENST00000466285 THOC1Q96FV9 657 aaKnown RBP17.66■□□□□ 0.42
COL6A1-203ENST00000466285 MCHR1Q99705 422 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 SH3GL3Q99963 347 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 RACGAP1Q9H0H5 632 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 TMEM27Q9HBJ8 222 aa17.66■□□□□ 0.42
COL6A1-203ENST00000466285 RP2O75695 350 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 VENTXO95231 258 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 C8BP07358 591 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 FAM157BP0CG42 384 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 ADORA3P0DMS8 318 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 GLRXP35754 106 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 SRP14P37108 136 aaKnown RBP17.65■□□□□ 0.42
COL6A1-203ENST00000466285 DVL1P1P54792 670 aaPredicted RBP17.65■□□□□ 0.42
COL6A1-203ENST00000466285 SQLEQ14534 574 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 ZNF74Q16587 644 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 TMEM255AQ5JRV8 349 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 BEND6Q5SZJ8 279 aaPredicted RBP17.65■□□□□ 0.42
COL6A1-203ENST00000466285 LRFN4Q6PJG9 635 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 PXKQ7Z7A4 578 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 OR5J2Q8NH18 312 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 EPYCQ99645 322 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 SPATA5L1Q9BVQ7 753 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 ZNF275Q9NSD4 429 aaPredicted RBP17.65■□□□□ 0.42
COL6A1-203ENST00000466285 TAS2R5Q9NYW4 299 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 TREM2Q9NZC2 230 aa17.65■□□□□ 0.42
COL6A1-203ENST00000466285 TCF21O43680 179 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 RAB36O95755 333 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 CH25HO95992 272 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 ERCC1P07992 297 aaPredicted RBP17.64■□□□□ 0.41
COL6A1-203ENST00000466285 CD247P20963 164 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 SLC6A2P23975 617 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 RUNX1T1Q06455 604 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 TRMT5Q32P41 509 aaKnown RBP17.64■□□□□ 0.41
COL6A1-203ENST00000466285 RUNDC3AQ59EK9 446 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 ENTPD8Q5MY95 495 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 DEF8Q6ZN54 512 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 CCDC36Q8IYA8 594 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 SEMA6DQ8NFY4 1073 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 TAMM41Q96BW9 452 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 CCDC28BQ9BUN5 200 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 B3GAT2Q9NPZ5 323 aa17.64■□□□□ 0.41
COL6A1-203ENST00000466285 PRORSD1PA6NEY8 169 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 ZNF726A6NNF4 738 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 CHP2O43745 196 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 SAGP10523 405 aaPredicted RBP17.63■□□□□ 0.41
COL6A1-203ENST00000466285 GKAP1Q5VSY0 366 aaPredicted RBP17.63■□□□□ 0.41
COL6A1-203ENST00000466285 C1orf229Q6ZS94 237 aaPredicted RBP17.63■□□□□ 0.41
COL6A1-203ENST00000466285 SLC35D2Q76EJ3 337 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 RANBP3LQ86VV4 465 aaPredicted RBP17.63■□□□□ 0.41
COL6A1-203ENST00000466285 SLC22A24Q8N4F4 322 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 RFLNBQ8N5W9 214 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 IL17RDQ8NFM7 739 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 ZNF385DQ9H6B1 395 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 METTL17Q9H7H0 456 aaPredicted RBP17.63■□□□□ 0.41
COL6A1-203ENST00000466285 TMEM38BQ9NVV0 291 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 GLTPQ9NZD2 209 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 SELENONQ9NZV5 590 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 ANGPT4Q9Y264 503 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 ARHGAP32A7KAX9 2087 aa17.63■□□□□ 0.41
COL6A1-203ENST00000466285 DYSFO75923 2080 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 ERLIN1O75477 346 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 UBL3O95164 117 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 PGA4P0DJD7 388 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 PGA3P0DJD8 388 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 PPIBP23284 216 aaKnown RBP17.62■□□□□ 0.41
COL6A1-203ENST00000466285 RBMXP38159 391 aaKnown RBP17.62■□□□□ 0.41
COL6A1-203ENST00000466285 GPR6P46095 362 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-203ENST00000466285 EVX1P49640 407 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 MYBPC1Q00872 1141 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 TTMPQ5BVD1 217 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 SWT1Q5T5J6 900 aaKnown RBP17.62■□□□□ 0.41
COL6A1-203ENST00000466285 AVPI1Q5T686 147 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 ZNF613Q6PF04 617 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 THSD4Q6ZMP0 1018 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 DHDDSQ86SQ9 333 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 MEX3DQ86XN8 651 aaKnown RBP17.62■□□□□ 0.41
COL6A1-203ENST00000466285 ZNF607Q96SK3 696 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 PRSS27Q9BQR3 290 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 DUSP13Q9UII6 198 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 FBXO9Q9UK97 447 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-203ENST00000466285 SLC7A7Q9UM01 511 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 CACNG2Q9Y698 323 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 TANC2Q9HCD6 1990 aa17.62■□□□□ 0.41
COL6A1-203ENST00000466285 A0A1W2PPW3 197 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 M0QX08 132 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 TGDSO95455 350 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 MT-ATP6P00846 226 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 AVPP01185 164 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 SERPINA5P05154 406 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 TNFRSF1BP20333 461 aa17.61■□□□□ 0.41
COL6A1-203ENST00000466285 ACHEP22303 614 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms