RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 LRR1Q96L50 414 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 CCT8L2Q96SF2 557 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 EMC6Q9BV81 110 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 MRPL37Q9BZE1 423 aaKnown RBP8.34□□□□□ -1.07
USP39-212ENST00000465514 REV1Q9UBZ9 1251 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 CORINQ9Y5Q5 1042 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 ARHGAP32A7KAX9 2087 aa8.34□□□□□ -1.07
USP39-212ENST00000465514 A0A087WUJ7 227 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 TRAV20A0A0B4J274 112 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 SYNGR3O43761 229 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 BGLAPP02818 100 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 GAAP10253 952 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 ZNF35P13682 527 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 ZNF14P17017 642 aaPredicted RBP8.33□□□□□ -1.08
USP39-212ENST00000465514 MDKP21741 143 aaPredicted RBP8.33□□□□□ -1.08
USP39-212ENST00000465514 PRTN3P24158 256 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 EVX1P49640 407 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 POU3F1Q03052 451 aaPredicted RBP8.33□□□□□ -1.08
USP39-212ENST00000465514 CAMK2DQ13557 499 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 MFSD13AQ14CX5 517 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 OR1Q1Q15612 314 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 TRMT5Q32P41 509 aaKnown RBP8.33□□□□□ -1.08
USP39-212ENST00000465514 GLIPR1L2Q4G1C9 344 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 GCNT6Q5T4J0 391 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 FAM91A1Q658Y4 838 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 REEP3Q6NUK4 255 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 DHRS4L2Q6PKH6 230 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 NHLRC1Q6VVB1 395 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 Q6ZPA2 131 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 ZNF627Q7L945 461 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 KRT73Q86Y46 540 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 MSRB3Q8IXL7 192 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 C10orf111Q8N326 155 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 SIGLECL1Q8N7X8 197 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 OR6S1Q8NH40 331 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 SLC41A3Q96GZ6 507 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 ZNF75AQ96N20 296 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 SYT3Q9BQG1 590 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 SPATA5L1Q9BVQ7 753 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 ASPNQ9BXN1 380 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 TMPRSS13Q9BYE2 586 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 NTN4Q9HB63 628 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 B3GAT2Q9NPZ5 323 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 G6PC2Q9NQR9 355 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 SLC25A37Q9NYZ2 338 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 TREM2Q9NZC2 230 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 SELENONQ9NZV5 590 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 SLAMF8Q9P0V8 285 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 RAB21Q9UL25 225 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 POFUT2Q9Y2G5 429 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 NOX1Q9Y5S8 564 aa8.33□□□□□ -1.08
USP39-212ENST00000465514 A0A0B4J2E0 115 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 A0A1B0GX12 115 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 ZNF726A6NNF4 738 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 M0R233 179 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 PLPP3O14495 311 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 WNT9BO14905 357 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 TPST2O60704 377 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 PRSS23O95084 383 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 TFP02787 698 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 HPXP02790 462 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 SAGP10523 405 aaPredicted RBP8.32□□□□□ -1.08
USP39-212ENST00000465514 B4GALT1P15291 398 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 TCN1P20061 433 aaPredicted RBP8.32□□□□□ -1.08
USP39-212ENST00000465514 COL8A2P25067 703 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 GLRXP35754 106 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 ALDH3B1P43353 468 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 GIPRP48546 466 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 PTDSS1P48651 473 aaKnown RBP8.32□□□□□ -1.08
USP39-212ENST00000465514 SLC18A1P54219 525 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 NCALDP61601 193 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 RAB1AP62820 205 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 CDK6Q00534 326 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 PUDPQ08623 228 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 PMS2P3Q13401 168 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 ELFN2Q5R3F8 820 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 LRIF1Q5T3J3 769 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 GKAP1Q5VSY0 366 aaPredicted RBP8.32□□□□□ -1.08
USP39-212ENST00000465514 EPGNQ6UW88 154 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 RBMS3Q6XE24 437 aaKnown RBP8.32□□□□□ -1.08
USP39-212ENST00000465514 LRP11Q86VZ4 500 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 CARM1Q86X55 608 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 FUNDC1Q8IVP5 155 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 C10orf53Q8N6V4 93 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 SCAIQ8N9R8 606 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 OR6N1Q8NGY5 312 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 NANPQ8TBE9 248 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 LRRC58Q96CX6 371 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 MOGAT1Q96PD6 335 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 EPYCQ99645 322 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 WFDC6Q9BQY6 131 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 ULBP2Q9BZM5 246 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 MS4A5Q9H3V2 200 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 TMEM27Q9HBJ8 222 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 MRPL39Q9NYK5 338 aaKnown RBP8.32□□□□□ -1.08
USP39-212ENST00000465514 NKIRAS1Q9NYS0 192 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 ZNF224Q9NZL3 707 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 TESQ9UGI8 421 aaKnown RBP8.32□□□□□ -1.08
USP39-212ENST00000465514 FZR1Q9UM11 496 aa8.32□□□□□ -1.08
USP39-212ENST00000465514 USH1CQ9Y6N9 552 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms