RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 MFSD13AQ14CX5 517 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 ZNF362Q5T0B9 420 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-214ENST00000465269 KPRPQ5T749 579 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-214ENST00000465269 ATG16L1Q676U5 607 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 ANKFN1Q8N957 763 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 ANKK1Q8NFD2 765 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 GEMIN6Q8WXD5 167 aaKnown RBP12.6□□□□□ -0.39
HDAC6-214ENST00000465269 ZDHHC16Q969W1 377 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 COQ8BQ96D53 544 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 INTS9Q9NV88 658 aaKnown RBP12.6□□□□□ -0.39
HDAC6-214ENST00000465269 ASH2LQ9UBL3 628 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 SLC7A8Q9UHI5 535 aa12.6□□□□□ -0.39
HDAC6-214ENST00000465269 DYNC2H1Q8NCM8 4307 aaKnown RBP12.6□□□□□ -0.39
HDAC6-214ENST00000465269 IGLV3-9A0A075B6K5 115 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 CFAP73A6NFT4 308 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 FTCDNL1E5RQL4 147 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 H0YL77 283 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 AZIN1O14977 448 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 PEX11AO75192 247 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 LYPLA1O75608 230 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-214ENST00000465269 UBOX5O94941 541 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 RAB36O95755 333 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 SERPINE1P05121 402 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 ZNF250P15622 560 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 CBLP22681 906 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 ARRB2P32121 409 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 RPS5P46782 204 aaKnown RBP12.59□□□□□ -0.39
HDAC6-214ENST00000465269 PROK1P58294 105 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 STX3Q13277 289 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 SYPL1Q16563 259 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 PGS1Q32NB8 556 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 MRPL2Q5T653 305 aaKnown RBP12.59□□□□□ -0.39
HDAC6-214ENST00000465269 SAMD5Q5TGI4 173 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 CCBE1Q6UXH8 406 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-214ENST00000465269 C9orf139Q6ZV77 190 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 DDIASQ8IXT1 998 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 CCDC36Q8IYA8 594 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 LINC01006Q8NI28 216 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 DYDC1Q8WWB3 177 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 ELMOD3Q96FG2 381 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 RSPO3Q9BXY4 272 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-214ENST00000465269 NKIRAS2Q9NYR9 191 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 DNAJC15Q9Y5T4 150 aa12.59□□□□□ -0.39
HDAC6-214ENST00000465269 RYR2Q92736 4967 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 A8MVM7 634 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 SRRM5B3KS81 715 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 NPIPB7O75200 414 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 PLATP00750 562 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 IGHV1-46P01743 117 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 TFPTP0C1Z6 253 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 PRG2P13727 222 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 HLA-DOBP13765 273 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 SLC1A6P48664 564 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 ABCE1P61221 599 aaKnown RBP12.58□□□□□ -0.4
HDAC6-214ENST00000465269 BST1Q10588 318 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 C1DQ13901 141 aaKnown RBP12.58□□□□□ -0.4
HDAC6-214ENST00000465269 ATAD3BQ5T9A4 648 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 OR4F3Q6IEY1 312 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 ANKRD46Q86W74 232 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 CMIPQ8IY22 773 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 PIK3C3Q8NEB9 887 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 AGR3Q8TD06 166 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 DUSP26Q9BV47 211 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 PTDSS2Q9BVG9 487 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 C20orf27Q9GZN8 174 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 RASSF4Q9H2L5 321 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 ATAD3AQ9NVI7 634 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 TMED5Q9Y3A6 229 aa12.58□□□□□ -0.4
HDAC6-214ENST00000465269 TMEM114B3SHH9 223 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 HPRP00739 348 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 IGHV2-70P01814 119 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 SLC6A9P48067 706 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 ZNF81P51508 661 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 MAP2K6P52564 334 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 LOXL3P58215 753 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 SELENOVP59797 346 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 PAX8Q06710 450 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 RBBP4Q09028 425 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 MMEL1Q495T6 779 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 SPATA46Q5T0L3 261 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 RUSC1-AS1Q66K80 236 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 SKA3Q8IX90 412 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 RIMKLAQ8IXN7 391 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 C20orf196Q8IYI0 205 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 OR4A15Q8NGL6 344 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 OR10S1Q8NGN2 331 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 OXGR1Q96P68 337 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 SLC38A1Q9H2H9 487 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 POLE3Q9NRF9 147 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 GPR160Q9UJ42 338 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 POFUT2Q9Y2G5 429 aa12.57□□□□□ -0.4
HDAC6-214ENST00000465269 AGAP5A6NIR3 686 aa12.56□□□□□ -0.4
HDAC6-214ENST00000465269 ZSCAN5BA6NJL1 495 aa12.56□□□□□ -0.4
HDAC6-214ENST00000465269 M0R082 166 aa12.56□□□□□ -0.4
HDAC6-214ENST00000465269 FAAHO00519 579 aa12.56□□□□□ -0.4
HDAC6-214ENST00000465269 CLPXO76031 633 aa12.56□□□□□ -0.4
HDAC6-214ENST00000465269 LSP1P33241 339 aa12.56□□□□□ -0.4
HDAC6-214ENST00000465269 SERPINB5P36952 375 aa12.56□□□□□ -0.4
HDAC6-214ENST00000465269 RPL3P39023 403 aaKnown RBP12.56□□□□□ -0.4
HDAC6-214ENST00000465269 ACAA2P42765 397 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms