RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ZGRF1Q86YA3 2104 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 ASAH2BP0C7U1 165 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 SAGP10523 405 aaPredicted RBP15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 EDN3P14138 238 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 GRPRP30550 384 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 BMXP51813 675 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 SLC35A1P78382 337 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 GXYLT1Q4G148 440 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 EMC4Q5J8M3 183 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 PDSS1Q5T2R2 415 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 GFRALQ6UXV0 394 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 OR5M9Q8NGP3 310 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 S100ZQ8WXG8 99 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 ZNF845Q96IR2 970 aaPredicted RBP15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 SLIRPQ9GZT3 109 aaKnown RBP15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 ALKBH4Q9NXW9 302 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 H2AFY2Q9P0M6 372 aaPredicted RBP15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 SEC14L4Q9UDX3 406 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 ZNF229Q9UJW7 825 aa15.12■□□□□ 0.01
EXOSC3-203ENST00000465229 KLK2P20151 261 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 AGFG1P52594 562 aaKnown RBP15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 RPS3AP61247 264 aaKnown RBP15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 CSNK2A1P68400 391 aaPredicted RBP15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 H3F3AP84243 136 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 FHL1Q13642 323 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 MFSD13AQ14CX5 517 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 SSX1Q16384 188 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 CXXC5Q7LFL8 322 aaKnown RBP15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 MAMDC2Q7Z304 686 aaPredicted RBP15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 ADCK1Q86TW2 530 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 OAFQ86UD1 273 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 PM20D2Q8IYS1 436 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 OR13C2Q8NGS9 318 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 SIAEQ9HAT2 523 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 HINT3Q9NQE9 182 aaKnown RBP15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 NDUFB11Q9NX14 153 aa15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 CCDC59Q9P031 241 aaKnown RBP15.11■□□□□ 0.01
EXOSC3-203ENST00000465229 SHANK1Q9Y566 2161 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 DNPH1O43598 174 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 AKR7A3O95154 331 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 IGHA1P01876 353 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 SLC6A6P31641 620 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 ETV1P50549 477 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 WNT4P56705 351 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 SGCBQ16585 318 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 CPOQ8IVL8 374 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 TMEM99Q8N816 258 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 OR9Q1Q8NGQ5 310 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 OR51A7Q8NH64 312 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 ZNF417Q8TAU3 575 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 TNFRSF13CQ96RJ3 184 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 ZNF587Q96SQ5 575 aaPredicted RBP15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 OR51E2Q9H255 320 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 TIGARQ9NQ88 270 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 MRPL39Q9NYK5 338 aaKnown RBP15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 CORINQ9Y5Q5 1042 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 PMF1-BGLAPU3KQ54 211 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 FAM208BQ5VWN6 2430 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 TRAV27A0A087WT01 109 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 ZNF814B7Z6K7 855 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 EIF1BO60739 113 aaKnown RBP15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 HIST1H2ABP04908 130 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 TSPAN19P0C672 248 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 CPEP16870 476 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 ENPP1P22413 925 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 PSMA1P25786 263 aaKnown RBP15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 P2RY4P51582 365 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 PAQR6Q6TCH4 344 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 PLXDC2Q6UX71 529 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 THSD4Q6ZMP0 1018 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 H1FNTQ75WM6 255 aaPredicted RBP15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 MEPCEQ7L2J0 689 aaKnown RBP15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 HIST3H2AQ7L7L0 130 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 SCAIQ8N9R8 606 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 OR5J2Q8NH18 312 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 FAM57AQ8TBR7 257 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 ZPLD1Q8TCW7 415 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 HIST1H2ACQ93077 130 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 CPNE4Q96A23 557 aaPredicted RBP15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 UCN2Q96RP3 112 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 IFT27Q9BW83 186 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 ASPNQ9BXN1 380 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 NXF2Q9GZY0 626 aaKnown RBP15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 ENKD1Q9H0I2 346 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 MMP27Q9H306 513 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 HMG20AQ9NP66 347 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 PAQR5Q9NXK6 330 aaPredicted RBP15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 IL20RAQ9UHF4 553 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 ALPK2Q86TB3 2170 aa15.1■□□□□ 0.01
EXOSC3-203ENST00000465229 IGHV3-15A0A0B4J1V0 119 aa15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 AHRRA9YTQ3 701 aa15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 CLDN25C9JDP6 229 aa15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 BLOC1S5-TXNDC5H3BN57 136 aa15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 J3QRE1 110 aa15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 PLPP3O14495 311 aa15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 SMAD9O15198 467 aaKnown RBP15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 RAMP1O60894 148 aa15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 SLC2A10O95528 541 aa15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 LIMS3P0CW19 117 aa15.09■□□□□ 0.01
EXOSC3-203ENST00000465229 LIMS4P0CW20 117 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms