RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 ZNF587BE7ETH6 402 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 DEAF1O75398 565 aaPredicted RBP16.63■□□□□ 0.25
LMNB1-204ENST00000463908 RAD51DO75771 328 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 TP53P04637 393 aaPredicted RBP16.63■□□□□ 0.25
LMNB1-204ENST00000463908 IGFBP1P08833 259 aaPredicted RBP16.63■□□□□ 0.25
LMNB1-204ENST00000463908 IL32P24001 234 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 FASP25445 335 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 RPL4P36578 427 aaKnown RBP16.63■□□□□ 0.25
LMNB1-204ENST00000463908 DAP3P51398 398 aaKnown RBP16.63■□□□□ 0.25
LMNB1-204ENST00000463908 TOP3AQ13472 1001 aaPredicted RBP16.63■□□□□ 0.25
LMNB1-204ENST00000463908 TAF11Q15544 211 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 FAM122BQ7Z309 247 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 AMIGO2Q86SJ2 522 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 OR6N1Q8NGY5 312 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 ZNF519Q8TB69 540 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 GTPBP3Q969Y2 492 aaKnown RBP16.63■□□□□ 0.25
LMNB1-204ENST00000463908 NMD3Q96D46 503 aaKnown RBP16.63■□□□□ 0.25
LMNB1-204ENST00000463908 BOD1Q96IK1 185 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 SAMD8Q96LT4 415 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 Q96M85 177 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 OR52D1Q9H346 318 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 CRLF2Q9HC73 371 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 GLTPQ9NZD2 209 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 MGAT4BQ9UQ53 548 aa16.63■□□□□ 0.25
LMNB1-204ENST00000463908 CIB4A0PJX0 185 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 ARRDC5A6NEK1 342 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 ENTPD5O75356 428 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 E2F6O75461 281 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 PPP3CBP16298 524 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 CDH2P19022 906 aaPredicted RBP16.62■□□□□ 0.25
LMNB1-204ENST00000463908 ACVR1BP36896 505 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 CSNK1A1P48729 337 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 ARF1P84077 181 aaKnown RBP16.62■□□□□ 0.25
LMNB1-204ENST00000463908 DAZAP2Q15038 168 aaPredicted RBP16.62■□□□□ 0.25
LMNB1-204ENST00000463908 TAB1Q15750 504 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 CEACAM16Q2WEN9 425 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 DPY19L2P2Q6ZN68 376 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 ZNF620Q6ZNG0 422 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 CLDN22Q8N7P3 220 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 ARIH2OSQ8N7S6 290 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 WDR31Q8NA23 367 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 SYT14Q8NB59 555 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 BCL2L2Q92843 193 aaPredicted RBP16.62■□□□□ 0.25
LMNB1-204ENST00000463908 MARVELD3Q96A59 401 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 ZC3HAV1LQ96H79 300 aaKnown RBP16.62■□□□□ 0.25
LMNB1-204ENST00000463908 KCNK17Q96T54 332 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 MED18Q9BUE0 208 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 POLDIP3Q9BY77 421 aaKnown RBP16.62■□□□□ 0.25
LMNB1-204ENST00000463908 EGLN3Q9H6Z9 239 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 IL20Q9NYY1 176 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 IER3IP1Q9Y5U9 82 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 CSMD1Q96PZ7 3565 aa16.62■□□□□ 0.25
LMNB1-204ENST00000463908 OR5H1A6NKK0 313 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 IGHG1P01857 330 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 QDPRP09417 244 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 PRF1P14222 555 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 OR7E24Q6IFN5 339 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 SHQ1Q6PI26 577 aaKnown RBP16.61■□□□□ 0.25
LMNB1-204ENST00000463908 SEZ6L2Q6UXD5 910 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 CD300LDQ6UXZ3 194 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 RASSF6Q6ZTQ3 369 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 ABHD12BQ7Z5M8 362 aaPredicted RBP16.61■□□□□ 0.25
LMNB1-204ENST00000463908 OR1K1Q8NGR3 316 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 HSD17B8Q92506 261 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 MCHR2Q969V1 340 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 NRBF2Q96F24 287 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 PLA2G12AQ9BZM1 189 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 NELFAQ9H3P2 528 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 SLC24A3Q9HC58 644 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 REV1Q9UBZ9 1251 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 ABCA12Q86UK0 2595 aa16.61■□□□□ 0.25
LMNB1-204ENST00000463908 IGKV1D-43A0A0B4J1Z2 117 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 FAM221AA4D161 298 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 CENPBD1B2RD01 187 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 SIAH2O43255 324 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 ZNF133P52736 654 aaPredicted RBP16.6■□□□□ 0.25
LMNB1-204ENST00000463908 CLRN1P58418 232 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 MYBPC1Q00872 1141 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 TGFBR3Q03167 851 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 HIKESHIQ53FT3 197 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 MESTQ5EB52 335 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 TIMM23BQ5SRD1 257 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 C1orf162Q8NEQ5 155 aaPredicted RBP16.6■□□□□ 0.25
LMNB1-204ENST00000463908 OR8D4Q8NGM9 314 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 OR5K1Q8NHB7 308 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 FANK1Q8TC84 345 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 PKP2Q99959 881 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 USB1Q9BQ65 265 aaKnown RBP16.6■□□□□ 0.25
LMNB1-204ENST00000463908 BDH2Q9BUT1 245 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 ULBP2Q9BZM5 246 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 SEMA6AQ9H2E6 1030 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 GRHPRQ9UBQ7 328 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 CDH10Q9Y6N8 788 aa16.6■□□□□ 0.25
LMNB1-204ENST00000463908 A0A096LPE4 126 aa16.59■□□□□ 0.25
LMNB1-204ENST00000463908 A0A1W2PPZ6 126 aa16.59■□□□□ 0.25
LMNB1-204ENST00000463908 A0A1W2PR80 420 aa16.59■□□□□ 0.25
LMNB1-204ENST00000463908 A6NIZ1 184 aa16.59■□□□□ 0.25
LMNB1-204ENST00000463908 IMPA2O14732 288 aa16.59■□□□□ 0.25
LMNB1-204ENST00000463908 ARHGEF9O43307 516 aa16.59■□□□□ 0.25
LMNB1-204ENST00000463908 PPP1R3DO95685 299 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms