RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 BAHCC1Q9P281 2608 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 IGLV3-22A0A075B6J6 115 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TRAV14DV4A0A0A6YYC5 116 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SERTM2A0A1B0GWG4 89 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 OR51F1A6NGY5 319 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 DRGXA6NNA5 263 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 VSTM5A8MXK1 200 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 PYCARD-AS1I3L0S3 204 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 RFXANKO14593 260 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CCSO14618 274 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TLR5O60602 858 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SH3BGRLO75368 114 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ABLIM3O94929 683 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CPSF4O95639 269 aaKnown RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 PTBP3O95758 552 aaKnown RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 GASTP01350 101 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CST2P09228 141 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 PRR35P0CG20 571 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 VSIG10L2P0DP72 767 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 PIPP12273 146 aaPredicted RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 PAX1P15863 534 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SERPINA2P20848 420 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 S1PR1P21453 382 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CD1CP29017 333 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ALDH3B1P43353 468 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 RAB7AP51149 207 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CCR8P51685 355 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CD81P60033 236 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 UBE2G2P60604 165 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 HSD11B2P80365 405 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 RPL19P84098 196 aaKnown RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 PITPNAQ00169 270 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SP4Q02446 784 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CACNG1Q06432 222 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 RING1Q06587 406 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ABHD18Q0P651 414 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF750Q32MQ0 723 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SLC25A35Q3KQZ1 300 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ARHGAP11BQ3KRB8 267 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 XKR7Q5GH72 579 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 RNLSQ5VYX0 342 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF343Q6P1L6 599 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TEX38Q6PEX7 206 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 C1orf122Q6ZSJ8 110 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF621Q6ZSS3 439 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TMPPEQ6ZT21 453 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SCD5Q86SK9 330 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF573Q86YE8 665 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 LAS2Q8IYD9 372 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 NRSN1Q8IZ57 195 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 OR6V1Q8N148 313 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 MUC20Q8N307 709 aaPredicted RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CPXM2Q8N436 756 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SLC35G3Q8N808 338 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SIDT2Q8NBJ9 832 aaKnown RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 C2CD4AQ8NCU7 369 aaPredicted RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SDR9C7Q8NEX9 313 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 OR4D9Q8NGE8 314 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 OR8U1Q8NH10 309 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 MRGPRDQ8TDS7 321 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 RNF141Q8WVD5 230 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CORO2AQ92828 525 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SMARCD2Q92925 531 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 MR1Q95460 341 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 CLDN23Q96B33 292 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 NTNG2Q96CW9 530 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 DNAJA3Q96EY1 480 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SHDQ96IW2 340 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 KIRREL1Q96J84 757 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 LCORQ96JN0 433 aaPredicted RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SLC6A18Q96N87 628 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TAAR9Q96RI9 348 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TP53RKQ96S44 253 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF426Q9BUY5 554 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TRMT61BQ9BVS5 477 aaKnown RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 PARP12Q9H0J9 701 aaKnown RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ATG5Q9H1Y0 275 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 PRORYQ9H606 182 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ASB8Q9H765 288 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 NMNAT1Q9HAN9 279 aaPredicted RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 MIEF1Q9NQG6 463 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TAS2R5Q9NYW4 299 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 COMMD9Q9P000 198 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 UPB1Q9UBR1 384 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 KLK11Q9UBX7 282 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SCML2Q9UQR0 700 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SF3B6Q9Y3B4 125 aaKnown RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ASB1Q9Y576 335 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 SLCO1B1Q9Y6L6 691 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TNRC6BQ9UPQ9 1833 aaKnown RBP3.29□□□□□ -1.88
COL8A1-205ENST00000463753 A0A1B0GV50 99 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 TRDV1A0A1B0GX56 115 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 A0A1W2PN81 502 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 DHRS7CA6NNS2 312 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 MEIS3P2A8K0S8 358 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF727A8MUV8 499 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 FAM171A2A8MVW0 826 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 AHRRA9YTQ3 701 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 MSTNO14793 375 aa3.29□□□□□ -1.88
COL8A1-205ENST00000463753 OGG1O15527 345 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms