RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CCL17Q92583 94 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 POP5Q969H6 163 aaKnown RBP12.31□□□□□ -0.44
SMC1A-204ENST00000463684 TXNDC15Q96J42 360 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 TSPAN32Q96QS1 320 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 ASPNQ9BXN1 380 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 OR51B6Q9H340 312 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 CDH20Q9HBT6 801 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 CHST2Q9Y4C5 530 aa12.31□□□□□ -0.44
SMC1A-204ENST00000463684 PPIAL4EA0A075B759 164 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 A0A087WUJ7 227 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 PPIAL4CA0A0B4J2A2 164 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 ISPDA4D126 451 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 PPIAL4DF5H284 164 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 RFXANKO14593 260 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 ITM2AO43736 263 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 HPRP00739 348 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 RNASE1P07998 156 aaKnown RBP12.3□□□□□ -0.44
SMC1A-204ENST00000463684 PATE4P0C8F1 98 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 PPIAL4FP0DN26 164 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 ETFAP13804 333 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 DSTNP60981 165 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 UFM1P61960 85 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 SLC3A1Q07837 685 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 PMS2P3Q13401 168 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 OCLNQ16625 522 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 RPS26P11Q5JNZ5 115 aaPredicted RBP12.3□□□□□ -0.44
SMC1A-204ENST00000463684 C6orf89Q6UWU4 347 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 ZNF781Q8N8C0 355 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 GLB1L3Q8NCI6 653 aaPredicted RBP12.3□□□□□ -0.44
SMC1A-204ENST00000463684 ICA1LQ8NDH6 482 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 SLC35B4Q969S0 331 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 ELMOD3Q96FG2 381 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 TEX37Q96LM6 180 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 BCL2L14Q9BZR8 327 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 RNF121Q9H920 327 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 THUMPD1Q9NXG2 353 aaKnown RBP12.3□□□□□ -0.44
SMC1A-204ENST00000463684 PLEK2Q9NYT0 353 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 UBAP1Q9NZ09 502 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 ZNF69Q9UC07 566 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 CACNG2Q9Y698 323 aa12.3□□□□□ -0.44
SMC1A-204ENST00000463684 FOXH1O75593 365 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 ANP32DO95626 131 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 PTHP01270 115 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 OR8G3PP0DMU2 310 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 AHCYP23526 432 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 CSNK1A1P48729 337 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 RPL14P50914 215 aaKnown RBP12.29□□□□□ -0.44
SMC1A-204ENST00000463684 UCP2P55851 309 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 TMEM53Q6P2H8 277 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 SLC22A24Q8N4F4 322 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 SCAIQ8N9R8 606 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 CPEB3Q8NE35 698 aaKnown RBP12.29□□□□□ -0.44
SMC1A-204ENST00000463684 OR1J2Q8NGS2 313 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 OR6S1Q8NH40 331 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 FGFBP3Q8TAT2 258 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 DNAJA4Q8WW22 397 aaPredicted RBP12.29□□□□□ -0.44
SMC1A-204ENST00000463684 SLC41A3Q96GZ6 507 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 TMEM19Q96HH6 336 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 ZBTB18Q99592 522 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 EPYCQ99645 322 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 LRMDAQ9H2I8 198 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 C1orf198Q9H425 327 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 SELENONQ9NZV5 590 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 KLHL14Q9P2G3 628 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 AUP1Q9Y679 476 aa12.29□□□□□ -0.44
SMC1A-204ENST00000463684 SERPINI2O75830 405 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 FARS2O95363 451 aaKnown RBP12.28□□□□□ -0.44
SMC1A-204ENST00000463684 CCL2P13500 99 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 GCH1P30793 250 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 ZNF81P51508 661 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 MVDP53602 400 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 ABCE1P61221 599 aaKnown RBP12.28□□□□□ -0.44
SMC1A-204ENST00000463684 ERVS71-1P61550 626 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 PUDPQ08623 228 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 TBC1D28Q2M2D7 210 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 ALG10BQ5I7T1 473 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 FAM209AQ5JX71 171 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 PXKQ7Z7A4 578 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 DPPA2Q7Z7J5 298 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 KIRREL3Q8IZU9 778 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 BCL6BQ8N143 479 aaPredicted RBP12.28□□□□□ -0.44
SMC1A-204ENST00000463684 PAQR4Q8N4S7 273 aaPredicted RBP12.28□□□□□ -0.44
SMC1A-204ENST00000463684 C10orf53Q8N6V4 93 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 LSMEM1Q8N8F7 131 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 EIF1ADQ8N9N8 165 aaKnown RBP12.28□□□□□ -0.44
SMC1A-204ENST00000463684 NUF2Q9BZD4 464 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 MS4A7Q9GZW8 240 aaPredicted RBP12.28□□□□□ -0.44
SMC1A-204ENST00000463684 ARMCX1Q9P291 453 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 LEF1Q9UJU2 399 aaPredicted RBP12.28□□□□□ -0.44
SMC1A-204ENST00000463684 PURGQ9UJV8 347 aaKnown RBP12.28□□□□□ -0.44
SMC1A-204ENST00000463684 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.28□□□□□ -0.44
SMC1A-204ENST00000463684 RAP2CQ9Y3L5 183 aa12.28□□□□□ -0.44
SMC1A-204ENST00000463684 IGKV1D-42A0A075B6H8 117 aa12.27□□□□□ -0.45
SMC1A-204ENST00000463684 IQCMA0A1B0GVH7 501 aa12.27□□□□□ -0.45
SMC1A-204ENST00000463684 A0A1B0GWA3 101 aa12.27□□□□□ -0.45
SMC1A-204ENST00000463684 WDR91A4D1P6 747 aa12.27□□□□□ -0.45
SMC1A-204ENST00000463684 CLDN34H7C241 214 aa12.27□□□□□ -0.45
SMC1A-204ENST00000463684 SNAP29O95721 258 aa12.27□□□□□ -0.45
SMC1A-204ENST00000463684 IGHV3-13P01766 116 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms