RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 ZNF768Q9H5H4 540 aaKnown RBP11.32□□□□□ -0.6
HDAC4-208ENST00000463007 OPN4Q9UHM6 478 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 DAPP1Q9UN19 280 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ITGA10O75578 1167 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 NDUFB2O95178 105 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ECDO95905 644 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-208ENST00000463007 TYRP1P17643 537 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ACTA2P62736 377 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ACTG2P63267 376 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ETFDHQ16134 617 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 TMEM205Q6UW68 189 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 UNQ6126/PRO20091Q6UXV3 157 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 TMPRSS11FQ6ZWK6 438 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF350Q9GZX5 532 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 GPR27Q9NS67 375 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 TAS2R5Q9NYW4 299 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 DTX4Q9Y2E6 619 aa11.32□□□□□ -0.6
HDAC4-208ENST00000463007 PTP4A3O75365 173 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 GABRA1P14867 456 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 LSSP48449 732 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 LUMP51884 338 aaPredicted RBP11.31□□□□□ -0.6
HDAC4-208ENST00000463007 PPP1CAP62136 330 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 ALG11Q2TAA5 492 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF626Q68DY1 528 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 TSSK4Q6SA08 328 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 USP53Q70EK8 1073 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 FAM220AQ7Z4H9 259 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF546Q86UE3 836 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 TMEM185AQ8NFB2 350 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 CASTOR1Q8WTX7 329 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 NSMAFQ92636 917 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 RSC1A1Q92681 617 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 HOXB13Q92826 284 aaPredicted RBP11.31□□□□□ -0.6
HDAC4-208ENST00000463007 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 SERINC2Q96SA4 455 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 ATG5Q9H1Y0 275 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 INPP5EQ9NRR6 644 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 RXFP3Q9NSD7 469 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 LRIT1Q9P2V4 623 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 SLC22A7Q9Y694 548 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 ASXL3Q9C0F0 2248 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 VPS13AQ96RL7 3174 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 C17orf51A8MQB3 221 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 ACOT7O00154 380 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 RDH16O75452 317 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 GIPP09681 153 aaPredicted RBP11.31□□□□□ -0.6
HDAC4-208ENST00000463007 IFI6P09912 130 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 LTBRP36941 435 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 CDKN2AP42771 156 aaKnown RBP11.31□□□□□ -0.6
HDAC4-208ENST00000463007 DLX5P56178 289 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 MC2RQ01718 297 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 OR2AK2Q8NG84 335 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 OR1S1Q8NH92 325 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 SCARB1Q8WTV0 552 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 SLC22A18Q96BI1 424 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 SHARPINQ9H0F6 387 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 WDR76Q9H967 626 aa11.31□□□□□ -0.6
HDAC4-208ENST00000463007 ANKRD20A5PA0PJZ0 165 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 DCDC2BA2VCK2 349 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 OGG1O15527 345 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 HCRTR1O43613 425 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 GALR3O60755 368 aaPredicted RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 PRAF2O60831 178 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 LYPD3O95274 346 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 HIST1H2ABP04908 130 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 PPP3CBP16298 524 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 GMFBP60983 142 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 UBE2IP63279 158 aaKnown RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 DMRTC1Q5HYR2 192 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 ARHGAP40Q5TG30 622 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 HACD4Q5VWC8 232 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF660Q6AZW8 331 aaPredicted RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 HIST3H2AQ7L7L0 130 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 JAZF1Q86VZ6 243 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 RNF113BQ8IZP6 322 aaKnown RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 SLC22A18ASQ8N1D0 253 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 BVESQ8NE79 360 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 OR4C3Q8NH37 302 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 HIST1H2ACQ93077 130 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 WBP1Q96G27 269 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 SLC38A3Q99624 504 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF416Q9BWM5 594 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 MKKSQ9NPJ1 570 aaPredicted RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 KIF25Q9UIL4 384 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF28P17035 718 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 HNRNPA2B1P22626 353 aaKnown RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 GPR18Q14330 331 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 ZNF169Q14929 603 aaPredicted RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 OVCH1Q7RTY7 1134 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 C7orf50Q9BRJ6 194 aaKnown RBP11.3□□□□□ -0.6
HDAC4-208ENST00000463007 POFUT1Q9H488 388 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 TMEM231Q9H6L2 316 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 PCDHB16Q9NRJ7 776 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 FRRS1LQ9P0K9 344 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 TMEM131Q92545 1883 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 A0A0B4J2E0 115 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 A0A1B0GX12 115 aa11.3□□□□□ -0.6
HDAC4-208ENST00000463007 FITM1A5D6W6 292 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms