RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 COQ7Q99807 217 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 GPR87Q9BY21 358 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 SRA1Q9HD15 236 aaKnown RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 MRPL39Q9NYK5 338 aaKnown RBP13.05□□□□□ -0.32
HDAC6-213ENST00000462730 COPS3Q9UNS2 423 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF292O60281 2723 aa13.05□□□□□ -0.32
HDAC6-213ENST00000462730 KNTC1P50748 2209 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 LOC101059948A0A1B0GTJ6 334 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 ANKRD34BA5PLL1 514 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 ETV2O00321 342 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-213ENST00000462730 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 RGS9O75916 674 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-213ENST00000462730 TFPIP10646 304 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 ACVR1BP36896 505 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 CAPZA2P47755 286 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 TGM4P49221 684 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 ACTA2P62736 377 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 ACTG2P63267 376 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 Q0VFX4 171 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 HNRNPA0Q13151 305 aaKnown RBP13.04□□□□□ -0.32
HDAC6-213ENST00000462730 INSL4Q14641 139 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 OR7A5Q15622 319 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 ACKR1Q16570 336 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 SLC25A53Q5H9E4 307 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 UTS2BQ765I0 119 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF511Q8NB15 262 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 POC1BQ8TC44 478 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 SLC25A46Q96AG3 418 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 MRGPRX4Q96LA9 322 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 MED18Q9BUE0 208 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 P4HTMQ9NXG6 502 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 FBXL2Q9UKC9 423 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 MOKQ9UQ07 419 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 AHCTF1Q8WYP5 2266 aa13.04□□□□□ -0.32
HDAC6-213ENST00000462730 SLC35F4A4IF30 521 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 FAM25AB3EWG3 89 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 FAM25CB3EWG5 89 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 FAM25GB3EWG6 89 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 XKRYO14609 159 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 MAGEB4O15481 346 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF208O43345 1280 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 RPL27P61353 136 aaKnown RBP13.03□□□□□ -0.32
HDAC6-213ENST00000462730 BAK1Q16611 211 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 RPTNQ6XPR3 784 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 TMPRSS12Q86WS5 348 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 RPS19BP1Q86WX3 136 aaKnown RBP13.03□□□□□ -0.32
HDAC6-213ENST00000462730 RAB43Q86YS6 212 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 OR2T4Q8NH00 348 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 MFSD8Q8NHS3 518 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF519Q8TB69 540 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 SNX33Q8WV41 574 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 SRRQ9GZT4 340 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 TXNIPQ9H3M7 391 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 MARCH7Q9H992 704 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 DIABLOQ9NR28 239 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 IQCMA0A1B0GVH7 501 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 SMIM30A4D0T7 59 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 H3BML4 177 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 DCTN6O00399 190 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 IL7P13232 177 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 ICAM2P13598 275 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 CSRP1P21291 193 aaKnown RBP13.03□□□□□ -0.32
HDAC6-213ENST00000462730 AZGP1P25311 298 aaKnown RBP13.03□□□□□ -0.32
HDAC6-213ENST00000462730 DDOSTP39656 456 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 MLF1P58340 268 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 RUNX1T1Q06455 604 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 SLC3A1Q07837 685 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 SNTA1Q13424 505 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 MFSD13AQ14CX5 517 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 ZFP69Q49AA0 526 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 CDONQ4KMG0 1287 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 TMEM91Q6ZNR0 172 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 PM20D2Q8IYS1 436 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 SYS1Q8N2H4 156 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 FADS6Q8N9I5 356 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 WDSUB1Q8N9V3 476 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 THAP4Q8WY91 577 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 MRPL48Q96GC5 212 aaKnown RBP13.03□□□□□ -0.32
HDAC6-213ENST00000462730 ST6GAL2Q96JF0 529 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 B3GNT4Q9C0J1 378 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 SYT4Q9H2B2 425 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 SLA2Q9H6Q3 261 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 DDX28Q9NUL7 540 aaKnown RBP13.03□□□□□ -0.32
HDAC6-213ENST00000462730 GNG8Q9UK08 70 aa13.03□□□□□ -0.32
HDAC6-213ENST00000462730 TVP23AA6NH52 213 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 A6NL46 340 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 EFNA2O43921 213 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 IGHMP01871 453 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.32
HDAC6-213ENST00000462730 GBX2P52951 348 aaPredicted RBP13.02□□□□□ -0.32
HDAC6-213ENST00000462730 RIPPLY1Q0D2K3 151 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 CHAF1BQ13112 559 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 EEF1A1P5Q5VTE0 462 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 SLC16A9Q7RTY1 509 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 OR6V1Q8N148 313 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 ARMC10Q8N2F6 343 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 TMEM156Q8N614 296 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 OR5M1Q8NGP8 315 aa13.02□□□□□ -0.32
HDAC6-213ENST00000462730 PELI1Q96FA3 418 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms