RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 PIKFYVEQ9Y2I7 2098 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 PDS5BQ9NTI5 1447 aa2.25□□□□□ -2.05
VCL-203ENST00000461383 TET2Q6N021 2002 aaPredicted RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 ARHGAP21Q5T5U3 1957 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 A0A0B4J2A0 478 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 TRBV11-1A0A0K0K1C0 115 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 SERTM2A0A1B0GWG4 89 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 PSMB11A5LHX3 300 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 TRIM49D1C9J1S8 452 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 H3BNH8 94 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 NPIPB7O75200 414 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 EIF3GO75821 320 aaKnown RBP eCLIP2.24□□□□□ -2.05
VCL-203ENST00000461383 CT62P0C5K7 136 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ZNF43P17038 809 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 HMOX2P30519 316 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 OTX1P32242 354 aaPredicted RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 FOXN2P32314 431 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 BTCP35070 178 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 NSG1P42857 185 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 NPBWR2P48146 333 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 TFPI2P48307 235 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 TMED10P49755 219 aaKnown RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 RORCP51449 518 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 NUP107P57740 925 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 RAB10P61026 200 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ACTA2P62736 377 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ACTG2P63267 376 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ACTC1P68032 377 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ACTA1P68133 377 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 PRPSAP1Q14558 356 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 KIAA0087Q14695 138 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 MRPL23Q16540 153 aaKnown RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 ZNF630Q2M218 657 aaPredicted RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 RFX4Q33E94 735 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ALKBH6Q3KRA9 238 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 COA6Q5JTJ3 125 aaKnown RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 PPM1LQ5SGD2 360 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 TWF2Q6IBS0 349 aaKnown RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 RFLNAQ6ZTI6 216 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 SSX9Q7RTT3 188 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 TMEM135Q86UB9 458 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 C11orf53Q8IXP5 236 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 GTPBP8Q8N3Z3 284 aaPredicted RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 VN1R2Q8NFZ6 395 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 OR4A4PQ8NGN8 299 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 OR1S2Q8NGQ3 325 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ZNF502Q8TBZ5 544 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 AGR3Q8TD06 166 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ACER1Q8TDN7 264 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ACMSDQ8TDX5 336 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 GEMIN6Q8WXD5 167 aaKnown RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 FRAT1Q92837 279 aaPredicted RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 OSBPL10Q9BXB5 764 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 IQCGQ9H095 443 aaKnown RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 NCOR1P1Q9H4R4 102 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 ASB8Q9H765 288 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 GEMIN7Q9H840 131 aaKnown RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 CCL28Q9NRJ3 127 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 PRR34Q9NV39 138 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 PTTG3PQ9NZH4 202 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 SHPKQ9UHJ6 478 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 VANGL2Q9ULK5 521 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 PACSIN2Q9UNF0 486 aaPredicted RBP2.24□□□□□ -2.05
VCL-203ENST00000461383 GOLT1BQ9Y3E0 138 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 NEUROG3Q9Y4Z2 214 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 HEBP2Q9Y5Z4 205 aa2.24□□□□□ -2.05
VCL-203ENST00000461383 CNTNAP1P78357 1384 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 ARHGAP23Q9P227 1491 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 A0A0G2JLM5 398 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 A0A0G2JN53 185 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 F6UB75 175 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 XKRYO14609 159 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 SLC31A2O15432 143 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 FAM189A1O60320 539 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 CACNG3O60359 315 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 CLPXO76031 633 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 INSP01308 110 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 FGF4P08620 206 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 PNMA6AP0CW24 399 aaPredicted RBP2.23□□□□□ -2.05
VCL-203ENST00000461383 ZNF19P17023 458 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 AK4P27144 223 aaPredicted RBP2.23□□□□□ -2.05
VCL-203ENST00000461383 SERPINB5P36952 375 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 SLC1A1P43005 524 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 UQCRFS1P47985 274 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 SSR4P51571 173 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 WNT4P56705 351 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 GPX6P59796 221 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 KRTAP10-12P60413 245 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 ZNF92Q03936 586 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 SMARCB1Q12824 385 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 UNC119Q13432 240 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 AQP6Q13520 282 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 CLINT1Q14677 625 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 IL17AQ16552 155 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 CCDC14Q49A88 953 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 CASC10Q5T4H9 136 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 C1orf185Q5T7R7 199 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 C22orf42Q6IC83 251 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 REEP3Q6NUK4 255 aa2.23□□□□□ -2.05
VCL-203ENST00000461383 ZADH2Q8N4Q0 377 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms