RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 ZNF878C9JN71 531 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 SYT7O43581 403 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 MSL3P1P0C860 447 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF136P52737 540 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 ACY1Q03154 408 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 RNASE10Q5GAN6 216 aaKnown RBP10.62□□□□□ -0.71
NPHP4-204ENST00000460696 UBE2NLQ5JXB2 153 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 LRRC69Q6ZNQ3 347 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF767PQ75MW2 155 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 PLPP7Q8NBV4 271 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 OR52I2Q8NH67 350 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 GPBAR1Q8TDU6 330 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 PELI1Q96FA3 418 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF578Q96N58 590 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-204ENST00000460696 OR2M2Q96R28 347 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 GON7Q9BXV9 100 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 MEPEQ9NQ76 525 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-204ENST00000460696 DNAJB12Q9NXW2 375 aaKnown RBP10.62□□□□□ -0.71
NPHP4-204ENST00000460696 FLRT3Q9NZU0 649 aa10.62□□□□□ -0.71
NPHP4-204ENST00000460696 IGHV5-51A0A0C4DH38 117 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 RAB3DO95716 219 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF43P17038 809 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 DCAF7P61962 342 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 FAM53BQ14153 422 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 EFR3AQ14156 821 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 SGCBQ16585 318 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 FAAP20Q6NZ36 180 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 GPR155Q7Z3F1 870 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 C10orf90Q96M02 699 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 UBQLN2Q9UHD9 624 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF346Q9UL40 294 aaKnown RBP10.61□□□□□ -0.71
NPHP4-204ENST00000460696 HHLA2Q9UM44 414 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 LSM2Q9Y333 95 aaKnown RBP10.61□□□□□ -0.71
NPHP4-204ENST00000460696 SPEF1Q9Y4P9 236 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 TRAV36DV7A0A075B6V5 113 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 TP53I11O14683 189 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 ZNF208O43345 1280 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 PEX14O75381 377 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 POU2F2P09086 479 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 PTHLHP12272 177 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 SLC2A5P22732 501 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 PPICP45877 212 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 CCR5P51681 352 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 BDH1Q02338 343 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 POU4F3Q15319 338 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 SLC16A9Q7RTY1 509 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 ASB12Q8WXK4 309 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 DHRS1Q96LJ7 313 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 AICDAQ9GZX7 198 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 TAS2R8Q9NYW2 309 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 PTPRQQ9UMZ3 2332 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 CEP295Q9C0D2 2601 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 A0A087WUJ7 227 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 OR6C68A6NDL8 312 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 CYR61O00622 381 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 AKR7A2O43488 359 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 GFRA3O60609 400 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 RAB40ALP0C0E4 278 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 ATF1P18846 271 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 ARPC4P59998 168 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 ELAVL1Q15717 326 aaKnown RBP10.61□□□□□ -0.71
NPHP4-204ENST00000460696 YIF1BQ5BJH7 314 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 PRAMEF20Q5VT98 475 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 HEPHL1Q6MZM0 1159 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 PAPD4Q6PIY7 484 aaKnown RBP10.61□□□□□ -0.71
NPHP4-204ENST00000460696 WDR88Q6ZMY6 472 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 ABI3BPQ7Z7G0 1075 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 OR14A16Q8NHC5 309 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 RAB40AQ8WXH6 277 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 EMC6Q9BV81 110 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 AUNIPQ9H7T9 357 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 B3GAT2Q9NPZ5 323 aa10.61□□□□□ -0.71
NPHP4-204ENST00000460696 DISC1C4P0D8 188 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 SEC14L5O43304 696 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 EPXP11678 715 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 FAM69AQ5T7M9 428 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 TMEM205Q6UW68 189 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 SYT13Q7L8C5 426 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 UEVLDQ8IX04 471 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 CMTM4Q8IZR5 234 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 ANKRD9Q96BM1 317 aaPredicted RBP10.6□□□□□ -0.71
NPHP4-204ENST00000460696 C3orf49Q96BT1 292 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 DDIT4LQ96D03 193 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 NKX3-1Q99801 234 aaPredicted RBP10.6□□□□□ -0.71
NPHP4-204ENST00000460696 SEC22CQ9BRL7 303 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 ADGRL4Q9HBW9 690 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 SRPK3Q9UPE1 567 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 EMC9Q9Y3B6 208 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 MMACHCQ9Y4U1 282 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 SDHAP31040 664 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 ACTBP60709 375 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 ACTG1P63261 375 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 SNTA1Q13424 505 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 MFSD13AQ14CX5 517 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 ACKR1Q16570 336 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 SLC35D3Q5M8T2 416 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 DHRS13Q6UX07 377 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 CD163Q86VB7 1156 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 CCDC28AQ8IWP9 274 aa10.6□□□□□ -0.71
NPHP4-204ENST00000460696 OR7G1Q8NGA0 311 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms