RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 RBP2P50120 134 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 NRG3P56975 720 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 RAC3P60763 192 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 LSM11P83369 360 aaKnown RBP eCLIP9.44□□□□□ -0.9
HERC4-207ENST00000460168 PLAURQ03405 335 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 CD47Q08722 323 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 OR1Q1Q15612 314 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 TRIP6Q15654 476 aaKnown RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 MEP1AQ16819 746 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 DGUOKQ16854 277 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 ZSWIM7Q19AV6 140 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 TMEM205Q6UW68 189 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 ZNF517Q6ZMY9 492 aaPredicted RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 Q6ZPB1 254 aaPredicted RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 TRILQ7L0X0 811 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 OR8H3Q8N146 312 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 EIF4E3Q8N5X7 224 aaKnown RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 AMER2Q8N7J2 671 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 C17orf47Q8NEP4 570 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 THAP3Q8WTV1 239 aaPredicted RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 ACOT11Q8WXI4 607 aaPredicted RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 R3HDM4Q96D70 268 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 C5orf34Q96MH7 638 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 GPR137Q96N19 417 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 TAAR9Q96RI9 348 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 SEMA4CQ9C0C4 833 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 POLR2J2Q9GZM3 115 aaKnown RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 POLR2J3Q9H1A7 115 aaKnown RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 TMEM27Q9HBJ8 222 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 MED9Q9NWA0 146 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 PEX16Q9Y5Y5 336 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 TSPAN2O60636 221 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 UTS2O95399 124 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 SOX14O95416 240 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 LY86O95711 162 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 MT-CO3P00414 261 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 THY1P04216 161 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 MMP11P24347 488 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 EEF1B2P24534 225 aaKnown RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 ABCD3P28288 659 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 AQP6Q13520 282 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 LCN1P1Q5VSP4 162 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 CDCP2Q5VXM1 449 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 ZNF550Q7Z398 422 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 SLC34A3Q8N130 599 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 C9orf62Q8N4C0 152 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 C12orf45Q8N5I9 185 aaPredicted RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 GATSQ8NAP1 163 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 NFAM1Q8NET5 270 aaPredicted RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 CNIH3Q8TBE1 160 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 PHOSPHO1Q8TCT1 267 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 GRHL3Q8TE85 626 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 TMEM255BQ8WV15 326 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 FYTTD1Q96QD9 318 aaKnown RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 PITX2Q99697 317 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 COL25A1Q9BXS0 654 aaPredicted RBP9.44□□□□□ -0.9
HERC4-207ENST00000460168 DGCR6LQ9BY27 220 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 FLRT3Q9NZU0 649 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 RPH3ALQ9UNE2 315 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 RNF24Q9Y225 148 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 SLC35A3Q9Y2D2 325 aa9.44□□□□□ -0.9
HERC4-207ENST00000460168 TRBV11-1A0A0K0K1C0 115 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 ICOSLGO75144 302 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 KLF7O75840 302 aaPredicted RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 NXPH2O95156 264 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 NTN1O95631 604 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 SLC2A1P11166 492 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 OSMP13725 252 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 PTNP21246 168 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 ACVR2AP27037 513 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 CRISP1P54107 249 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 GAGE1Q13065 139 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 SNTB1Q13884 538 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 PTGES3Q15185 160 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 CTU2Q2VPK5 515 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 NDUFAF6Q330K2 333 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 HES3Q5TGS1 186 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 NXNL2Q5VZ03 156 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 C1orf94Q6P1W5 598 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 PIGXQ8TBF5 258 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 LRFN3Q9BTN0 628 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 KRCC1Q9NPI7 259 aaPredicted RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 ZNF223Q9UK11 482 aaPredicted RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 PADI1Q9ULC6 663 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 PCNX2A6NKB5 2137 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 CCDC187A0A096LP49 1063 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 hCG_1807616A0A1W2PRN6 198 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 METTL21EPA6NDL7 271 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 GTPBP1O00178 669 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 HSPA12AO43301 675 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 ZFPL1O95159 310 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 ANGPTL1O95841 491 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 STAG3L3P0CL85 134 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 TBXA2RP21731 343 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 PAICSP22234 425 aaKnown RBP9.43□□□□□ -0.9
HERC4-207ENST00000460168 GIFP27352 417 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 GGT2P36268 569 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 CEACAM6P40199 344 aa9.43□□□□□ -0.9
HERC4-207ENST00000460168 RFC3P40938 356 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms