RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CCDC107Q8WV48 283 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 HSD17B8Q92506 261 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 ARSGQ96EG1 525 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 MAP6Q96JE9 813 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 C4orf45Q96LM5 186 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 OR8B4Q96RC9 309 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF587Q96SQ5 575 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-202ENST00000459727 COL25A1Q9BXS0 654 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-202ENST00000459727 NXF5Q9H1B4 397 aaKnown RBP8.03□□□□□ -1.12
HDAC3-202ENST00000459727 SCPEP1Q9HB40 452 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 CD93Q9NPY3 652 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 PNO1Q9NRX1 252 aaKnown RBP8.03□□□□□ -1.12
HDAC3-202ENST00000459727 C2orf42Q9NWW7 574 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 VSX1Q9NZR4 365 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-202ENST00000459727 DUX4Q9UBX2 424 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 UBQLN2Q9UHD9 624 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 MRM2Q9UI43 246 aaKnown RBP8.03□□□□□ -1.12
HDAC3-202ENST00000459727 SRPK3Q9UPE1 567 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 DTX4Q9Y2E6 619 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 MAB21L2Q9Y586 359 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 U3KQ87 197 aa8.03□□□□□ -1.12
HDAC3-202ENST00000459727 NUP210LQ5VU65 1888 aa8.02□□□□□ -1.12
HDAC3-202ENST00000459727 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 A0A1W2PPC1 479 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 TCRBV16S1A1N1A0A5B0 115 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 METTL12A8MUP2 240 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 H7C417 338 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 M0R233 179 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 HRKO00198 91 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 HCRTR2O43614 444 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 NUDT21O43809 227 aaKnown RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 SLC22A5O76082 557 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 BGLAPP02818 100 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 WNT1P04628 370 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 CYC1P08574 325 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 MELTFP08582 738 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 SRFP11831 508 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 M6PRP20645 277 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 OR3A3P47888 321 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 DAP3P51398 398 aaKnown RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 RIDAP52758 137 aaKnown RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 DLX5P56178 289 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 SLC26A5P58743 744 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ARPC4P59998 168 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 NANOS3P60323 173 aaKnown RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 GMFBP60983 142 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 GLO1Q04760 184 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 C1orf61Q13536 156 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 CAMK2DQ13557 499 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 EBPQ15125 230 aaKnown RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ZMYND11Q15326 602 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 FAM189A2Q15884 450 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 RAB11BQ15907 218 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 NNATQ16517 81 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ST3GAL2Q16842 350 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 MESTQ5EB52 335 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF542PQ5EBM4 170 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 CLLU1Q5K131 121 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 C1QTNF12Q5T7M4 302 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ANKRD16Q6P6B7 361 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 DEGS2Q6QHC5 323 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 CHRDL2Q6WN34 429 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF704Q6ZNC4 412 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 LRRTM1Q86UE6 522 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF761Q86XN6 746 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF679Q8IYX0 411 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 FRMD1Q8N878 549 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 UXS1Q8NBZ7 420 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ZNF680Q8NEM1 530 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 DNAAF1Q8NEP3 725 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 OR4D9Q8NGE8 314 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 OR52I2Q8NH67 350 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 LMX1AQ8TE12 382 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 TSEN15Q8WW01 171 aaKnown RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ST8SIA1Q92185 356 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 MCHR2Q969V1 340 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 TMEM106AQ96A25 262 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 ADIPOR1Q96A54 375 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 PTX4Q96A99 478 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 FOXRED1Q96CU9 486 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 MOGAT1Q96PD6 335 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 TGM7Q96PF1 710 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 TSPAN32Q96QS1 320 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 POTEKPQ9BYX7 375 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 OR8D2Q9GZM6 311 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 TXNIPQ9H3M7 391 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 DLL4Q9NR61 685 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 RYDENQ9NUL5 291 aaKnown RBP8.02□□□□□ -1.13
HDAC3-202ENST00000459727 FRRS1LQ9P0K9 344 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 SEMA5BQ9P283 1151 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 MTFP1Q9UDX5 166 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 PISDQ9UG56 409 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 OR5V1Q9UGF6 321 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 CLEC4AQ9UMR7 237 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 AUP1Q9Y679 476 aa8.02□□□□□ -1.13
HDAC3-202ENST00000459727 IGHV1OR15-9A0A0B4J2B8 117 aa8.01□□□□□ -1.13
HDAC3-202ENST00000459727 A0A1B0GX78 115 aa8.01□□□□□ -1.13
HDAC3-202ENST00000459727 A0A1W2PPK0 400 aa8.01□□□□□ -1.13
HDAC3-202ENST00000459727 A0A1W2PR77 199 aa8.01□□□□□ -1.13
HDAC3-202ENST00000459727 PRSS37A4D1T9 235 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms