RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 APRTP07741 180 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 ELANEP08246 267 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 LYL1P12980 280 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 EFNA1P20827 205 aaPredicted RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 C4BPBP20851 252 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 CA4P22748 312 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 ANOS1P23352 680 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 MARK3P27448 753 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 PMELP40967 661 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 CRYBB2P43320 205 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 GNPDA1P46926 289 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 PSMD8P48556 350 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 CCL11P51671 97 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 CDH11P55287 796 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 RAG2P55895 527 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 DLX5P56178 289 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 TPTEP56180 551 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 MAZP56270 477 aaKnown RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 PLP1P60201 277 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 CTXN1P60606 82 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 RANP62826 216 aaKnown RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 GTF2BQ00403 316 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 SLC10A7Q0GE19 358 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 GRIK2Q13002 908 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 PRPSAP1Q14558 356 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 UBXN2BQ14CS0 331 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 CDK10Q15131 360 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 PSG5Q15238 335 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 RPE65Q16518 533 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 SMIM21Q3B7S5 101 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 DCAF4L1Q3SXM0 396 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 HSD17B12Q53GQ0 312 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 TPRG1LQ5T0D9 272 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 UBE2UQ5VVX9 321 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 SP5Q6BEB4 398 aaPredicted RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 ZNF770Q6IQ21 691 aaPredicted RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 FAM71F2Q6NXP2 309 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 SH2D5Q6ZV89 423 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 COX15Q7KZN9 410 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 H2BFWTQ7Z2G1 175 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 NRARPQ7Z6K4 114 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 GLCCI1Q86VQ1 547 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 TMEM173Q86WV6 379 aaPredicted RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 SKA3Q8IX90 412 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 RDH10Q8IZV5 341 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 OR6K3Q8NGY3 331 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 OR6N2Q8NGY6 317 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 OR5AK3PQ8NH89 298 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 SPATA22Q8NHS9 363 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 CASTOR1Q8WTX7 329 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 ADAMTS14Q8WXS8 1223 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.86□□□□□ -1.63
VPS41-209ENST00000457055 MSI2Q96DH6 328 aaKnown RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 HPDLQ96IR7 371 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 Q96MF0 132 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 ZNF641Q96N77 438 aaPredicted RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 ZNF599Q96NL3 588 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 GUCD1Q96NT3 240 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 TGM7Q96PF1 710 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 MS4A10Q96PG2 267 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 ACOX2Q99424 681 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 SEPHS2Q99611 448 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 MICU1Q9BPX6 476 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 FUCA2Q9BTY2 467 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 GPR174Q9BXC1 333 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 ALOXE3Q9BYJ1 711 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 TLNRD1Q9H1K6 362 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 DHX35Q9H5Z1 703 aaKnown RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 LDAHQ9H6V9 325 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 ZNF334Q9HCZ1 680 aaPredicted RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 GAR1Q9NY12 217 aaKnown RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 B3GNT2Q9NY97 397 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 NKX1-2Q9UD57 310 aaPredicted RBP4.86□□□□□ -1.63
VPS41-209ENST00000457055 ZNF391Q9UJN7 358 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 HSPB11Q9Y547 144 aa4.86□□□□□ -1.63
VPS41-209ENST00000457055 FRG2CA6NGY1 282 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 PRSS29PA6NIE9 313 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 HIDE1A8MVS5 230 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 M0R3G1 203 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 CLDN5O00501 218 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 AZIN1O14977 448 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 YY2O15391 372 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 RGS5O15539 181 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 SLC19A2O60779 497 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 CEACAM4O75871 244 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 CNIH1O95406 144 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 SYNGR4O95473 234 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 C9P02748 559 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 HIST1H2ABP04908 130 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 RPLP0P05388 317 aaKnown RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 SFTPBP07988 381 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 HAPLN1P10915 354 aaPredicted RBP4.85□□□□□ -1.63
VPS41-209ENST00000457055 HIST1H2ADP20671 130 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 TBXA2RP21731 343 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 CD72P21854 359 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 S100GP29377 79 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 CSKP41240 450 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 AKR1C3P42330 323 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 GCLMP48507 274 aa4.85□□□□□ -1.63
VPS41-209ENST00000457055 RAB7AP51149 207 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms