RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 NDRG3Q9UGV2 375 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 IL20RAQ9UHF4 553 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 ADAM18Q9Y3Q7 739 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 DCHS2Q6V1P9 2916 aa12.42□□□□□ -0.42
SMPD4-215ENST00000457039 PKDREJQ9NTG1 2253 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 M0R3G1 203 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 FLNBO75369 2602 aaKnown RBP12.41□□□□□ -0.42
SMPD4-215ENST00000457039 E2F6O75461 281 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 RAD51DO75771 328 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 KRT33AO76009 404 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 IGHG1P01857 330 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 TP53P04637 393 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-215ENST00000457039 RPL4P36578 427 aaKnown RBP12.41□□□□□ -0.42
SMPD4-215ENST00000457039 ZNF133P52736 654 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-215ENST00000457039 ERVK-25P63136 954 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 TOP3AQ13472 1001 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-215ENST00000457039 DAZAP2Q15038 168 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-215ENST00000457039 STK11Q15831 433 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 CEACAM16Q2WEN9 425 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 C9orf135Q5VTT2 229 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 FAM205BPQ63HN1 556 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 SHQ1Q6PI26 577 aaKnown RBP12.41□□□□□ -0.42
SMPD4-215ENST00000457039 LRFN4Q6PJG9 635 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 SEZ6L2Q6UXD5 910 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 CD300LDQ6UXZ3 194 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 DPY19L2P2Q6ZN68 376 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 RASSF6Q6ZTQ3 369 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 CLDN22Q8N7P3 220 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 NOXO1Q8NFA2 376 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 OR1K1Q8NGR3 316 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 OR6N1Q8NGY5 312 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 LRTOMTQ8WZ04 291 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 KCNK17Q96T54 332 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 MED18Q9BUE0 208 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 NDEL1Q9GZM8 345 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 NELFAQ9H3P2 528 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 CRLF2Q9HC73 371 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 IL20Q9NYY1 176 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 STX18Q9P2W9 335 aaKnown RBP12.41□□□□□ -0.42
SMPD4-215ENST00000457039 MAGED1Q9Y5V3 778 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-215ENST00000457039 CDH10Q9Y6N8 788 aa12.41□□□□□ -0.42
SMPD4-215ENST00000457039 UNC79Q9P2D8 2635 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 CIB4A0PJX0 185 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 FAM221AA4D161 298 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 OR5H1A6NKK0 313 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 ENTPD5O75356 428 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 TXNDC12O95881 172 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 APEHP13798 732 aaKnown RBP12.4□□□□□ -0.42
SMPD4-215ENST00000457039 GSTM3P21266 225 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 CRYGSP22914 178 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 ACVR1BP36896 505 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 SH3BGRP55822 239 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-215ENST00000457039 TGFBR3Q03167 851 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 TAB1Q15750 504 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 MESTQ5EB52 335 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 TIMM23BQ5SRD1 257 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 OR7E24Q6IFN5 339 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 ZFP1Q6P2D0 407 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 AMIGO2Q86SJ2 522 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 P2RY8Q86VZ1 359 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 C17orf78Q8N4C9 275 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 WDR31Q8NA23 367 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 OR8D4Q8NGM9 314 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 OR5K1Q8NHB7 308 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 HSD17B8Q92506 261 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 GTPBP3Q969Y2 492 aaKnown RBP12.4□□□□□ -0.42
SMPD4-215ENST00000457039 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 C14orf79Q96F83 325 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 SAMD8Q96LT4 415 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 Q96M85 177 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 ALG12Q9BV10 488 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 PLA2G12AQ9BZM1 189 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 ULBP2Q9BZM5 246 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 EGLN3Q9H6Z9 239 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 B3GAT2Q9NPZ5 323 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 FBN2P35556 2912 aa12.4□□□□□ -0.42
SMPD4-215ENST00000457039 TEX13CA0A0J9YWL9 993 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 A6NIZ1 184 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF99A8MXY4 864 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-215ENST00000457039 ARPC3O15145 178 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 ANXA8P13928 327 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 PRKACGP22612 351 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 SDHAP31040 664 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 SLC6A6P31641 620 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 CLRN1P58418 232 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 RAP1BP61224 184 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 RAP1AP62834 184 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 ARF1P84077 181 aaKnown RBP12.39□□□□□ -0.43
SMPD4-215ENST00000457039 COX10Q12887 443 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 C10orf128Q5T292 105 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 RPL13AP3Q6NVV1 102 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 KLHL17Q6TDP4 642 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 ZNF627Q7L945 461 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 C10orf67Q8IYJ2 551 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 MAGEE2Q8TD90 523 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-215ENST00000457039 BCL2L2Q92843 193 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-215ENST00000457039 MCHR2Q969V1 340 aa12.39□□□□□ -0.43
SMPD4-215ENST00000457039 BDH2Q9BUT1 245 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms