RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	GTF3C1	Q12789	2109 aa		4.16	□□□□□ -1.74
COL21A1-204	ENST00000456983	FLNC	Q14315	2725 aa		4.15	□□□□□ -1.74
COL21A1-204	ENST00000456983	MED12L	Q86YW9	2145 aa		4.15	□□□□□ -1.74
COL21A1-204	ENST00000456983	TRAV36DV7	A0A075B6V5	113 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	TRAV27	A0A087WT01	109 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983		A0A087WUU8	490 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983		A0A1B0GVC2	190 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983		A0A1W2PRQ8	180 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	LIPT2	A6NK58	231 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	SLC22A20	A6NK97	555 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983		A8MVM7	634 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	C11orf98	E9PRG8	122 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983		H3BNX3	289 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	SULT2B1	O00204	365 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	MGST3	O14880	152 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	CLOCK	O15516	846 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ZNF208	O43345	1280 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	EFNA2	O43921	213 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	OR7A10	O76100	309 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	CCNB2	O95067	398 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	AKR7A3	O95154	331 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	SOX14	O95416	240 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	GPANK1	O95872	356 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	CH25H	O95992	272 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PLG	P00747	810 aa	Predicted RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	LDLR	P01130	860 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	POU2F1	P14859	743 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	FPR1	P21462	350 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	FAS	P25445	335 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	RBM34	P42696	430 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	GSS	P48637	474 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	CASP6	P55212	293 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	DLX5	P56178	289 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	CLDN15	P56746	228 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	SMIM11A	P58511	58 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	RPS3A	P61247	264 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	SIRPA	P78324	504 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ELF3	P78545	371 aa	Predicted RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	DGCR6	Q14129	220 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PON3	Q15166	354 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ATP6AP1	Q15904	470 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ZNF239	Q16600	458 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	IQCC	Q4KMZ1	466 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	KRTCAP3	Q53RY4	240 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	NHSL2	Q5HYW2	709 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PDSS1	Q5T2R2	415 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	C1orf185	Q5T7R7	199 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	AP1AR	Q63HQ0	302 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ABLIM2	Q6H8Q1	611 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	HMBOX1	Q6NT76	420 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PGBD2	Q6P3X8	592 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	TBPL2	Q6SJ96	375 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	RRM2B	Q7LG56	351 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	SLC46A3	Q7Z3Q1	461 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	TMEM179B	Q7Z7N9	219 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	GPAT4	Q86UL3	456 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	IGFN1	Q86VF2	1251 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	EPHX4	Q8IUS5	362 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	CHERP	Q8IWX8	916 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PM20D2	Q8IYS1	436 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	LNX2	Q8N448	690 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	LSM14A	Q8ND56	463 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ST6GALNAC3	Q8NDV1	305 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	OR10G2	Q8NGC3	310 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	OR4K5	Q8NGD3	323 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	FNDC9	Q8TBE3	224 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	FAM57A	Q8TBR7	257 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	SLC7A13	Q8TCU3	470 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ABHD3	Q8WU67	409 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ROBO4	Q8WZ75	1007 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	POP5	Q969H6	163 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	MIB2	Q96AX9	1013 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	ZHX1-C8orf76	Q96EF9	292 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	SGTB	Q96EQ0	304 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	WDYHV1	Q96HA8	205 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	MPP4	Q96JB8	637 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	MOGAT1	Q96PD6	335 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	BARD1	Q99728	777 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PKP2	Q99959	881 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PRSS27	Q9BQR3	290 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	TMEM43	Q9BTV4	400 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PTDSS2	Q9BVG9	487 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	TAPBPL	Q9BX59	468 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PRRG4	Q9BZD6	226 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	KLHL4	Q9C0H6	718 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	C12orf10	Q9HB07	376 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	S100A14	Q9HCY8	104 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	MEPE	Q9NQ76	525 aa	Predicted RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	PDP1	Q9P0J1	537 aa	Predicted RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	MCTS1	Q9ULC4	181 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	TMCC3	Q9ULS5	477 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	CLEC4A	Q9UMR7	237 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	OSGIN2	Q9Y236	505 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	TMEM5	Q9Y2B1	443 aa		4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	RRP15	Q9Y3B9	282 aa	Known RBP	4.15	□□□□□ -1.75
COL21A1-204	ENST00000456983	HDGFL3	Q9Y3E1	203 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms