RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 FMO6PO60774 539 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 ADORA3P0DMS8 318 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 AHCYP23526 432 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 ALDH3B1P43353 468 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 CDH15P55291 814 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 RAB1AP62820 205 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
GPC1-206ENST00000455111 ZNF613Q6PF04 617 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 CCDC36Q8IYA8 594 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 VANGL1Q8TAA9 524 aaPredicted RBP13.77□□□□□ -0.21
GPC1-206ENST00000455111 ATP6V1G3Q96LB4 118 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 TSPAN32Q96QS1 320 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 ZNF607Q96SK3 696 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 EPYCQ99645 322 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 CGREF1Q99674 301 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 RACGAP1Q9H0H5 632 aa13.77□□□□□ -0.21
GPC1-206ENST00000455111 KAT8Q9H7Z6 458 aaKnown RBP13.77□□□□□ -0.21
GPC1-206ENST00000455111 MOV10Q9HCE1 1003 aaKnown RBP13.77□□□□□ -0.21
GPC1-206ENST00000455111 FAM157AC9JC47 383 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 AKAP8O43823 692 aaKnown RBP13.76□□□□□ -0.21
GPC1-206ENST00000455111 CH25HO95992 272 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 CLPTM1O96005 669 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 ASAH2BP0C7U1 165 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 PGA4P0DJD7 388 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 PGA3P0DJD8 388 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 CCL2P13500 99 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 APEX1P27695 318 aaKnown RBP13.76□□□□□ -0.21
GPC1-206ENST00000455111 GLRXP35754 106 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 CSNK1A1P48729 337 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 ERVS71-1P61550 626 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 NCALDP61601 193 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 ZP4Q12836 540 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 CCNIQ14094 377 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 SLC35D2Q76EJ3 337 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 RANBP3LQ86VV4 465 aaPredicted RBP13.76□□□□□ -0.21
GPC1-206ENST00000455111 IL17RDQ8NFM7 739 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 OR6N1Q8NGY5 312 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 OR6X1Q8NH79 312 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 ADAMTS16Q8TE57 1224 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 SH3GL3Q99963 347 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 DYNLRB1Q9NP97 96 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 GLTPQ9NZD2 209 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 LEF1Q9UJU2 399 aaPredicted RBP13.76□□□□□ -0.21
GPC1-206ENST00000455111 SLC7A7Q9UM01 511 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 ANGPT4Q9Y264 503 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 POFUT2Q9Y2G5 429 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 CMAHPQ9Y471 501 aa13.76□□□□□ -0.21
GPC1-206ENST00000455111 EVPLLA8MZ36 301 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 FXYD1O00168 92 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 KPNA4O00629 521 aaPredicted RBP13.75□□□□□ -0.21
GPC1-206ENST00000455111 SYNGR3O43761 229 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 SERPINB7O75635 380 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 RP2O75695 350 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 MT-ATP6P00846 226 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 C8BP07358 591 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 TNFRSF1BP20333 461 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 EVX1P49640 407 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 CHN2P52757 468 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 HIST3H3Q16695 136 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 SLC22A24Q8N4F4 322 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 C10orf53Q8N6V4 93 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 C11orf65Q8NCR3 313 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 CLDND2Q8NHS1 167 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 STON2Q8WXE9 905 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 GTF3AQ92664 365 aaKnown RBP13.75□□□□□ -0.21
GPC1-206ENST00000455111 PCDHAC1Q9H158 963 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 TMEM38BQ9NVV0 291 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 REV1Q9UBZ9 1251 aa13.75□□□□□ -0.21
GPC1-206ENST00000455111 IGKV1D-43A0A0B4J1Z2 117 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 ZNF726A6NNF4 738 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 NAT2P11245 290 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 PCGF2P35227 344 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 MAGEB1P43366 347 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 UGT2B15P54855 530 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 RBBP4Q09028 425 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 HNRNPA0Q13151 305 aaKnown RBP13.74□□□□□ -0.21
GPC1-206ENST00000455111 ALKBH6Q3KRA9 238 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 NKAIN4Q8IVV8 208 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 LINC01356Q8N9X3 169 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 ZNF540Q8NDQ6 660 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 BHLHE22Q8NFJ8 381 aaPredicted RBP13.74□□□□□ -0.21
GPC1-206ENST00000455111 OR10A6Q8NH74 314 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 PFN4Q8NHR9 129 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 HPS1Q92902 700 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 ZNF347Q96SE7 839 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 SEPHS2Q99611 448 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 MRPL13Q9BYD1 178 aaKnown RBP13.74□□□□□ -0.21
GPC1-206ENST00000455111 C20orf141Q9NUB4 165 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 CORO2BQ9UQ03 480 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 NDUFAF1Q9Y375 327 aa13.74□□□□□ -0.21
GPC1-206ENST00000455111 DHHO43323 396 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 UBL3O95164 117 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 SERPINA5P05154 406 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 MMP7P09237 267 aaPredicted RBP13.73□□□□□ -0.21
GPC1-206ENST00000455111 TSPAN19P0C672 248 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 MYBPC1Q00872 1141 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 CYP51A1Q16850 503 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 RABL3Q5HYI8 236 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 CALHM3Q86XJ0 350 aa13.73□□□□□ -0.21
GPC1-206ENST00000455111 NMD3Q96D46 503 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms