RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 NKPD1Q17RQ9 610 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 GLIPR1L2Q4G1C9 344 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 RPS26P11Q5JNZ5 115 aaPredicted RBP6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 ELFN2Q5R3F8 820 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 CARD17Q5XLA6 110 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 NXNQ6DKJ4 435 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 ACSM5Q6NUN0 579 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 TMEM154Q6P9G4 183 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 PIWIL3Q7Z3Z3 882 aaKnown RBP6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 PXKQ7Z7A4 578 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 RANBP3LQ86VV4 465 aaPredicted RBP6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 MIER2Q8N344 545 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 MREGQ8N565 214 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 GOLGA6L1Q8N7Z2 621 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 OR4M2Q8NGB6 313 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 TRIM44Q96DX7 344 aaPredicted RBP6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 SLC41A3Q96GZ6 507 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 LRRC37BQ96QE4 947 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 FOXB1Q99853 325 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 PAIP2Q9BPZ3 127 aaKnown RBP6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 SYT3Q9BQG1 590 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 SUCNR1Q9BXA5 334 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 LRMDAQ9H2I8 198 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 TMEM27Q9HBJ8 222 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 KCNK9Q9NPC2 374 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 SDR39U1Q9NRG7 319 aaPredicted RBP6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 ZNF275Q9NSD4 429 aaPredicted RBP6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 SLCO1C1Q9NYB5 712 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 MRPL39Q9NYK5 338 aaKnown RBP6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 CORO2BQ9UQ03 480 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 CHST2Q9Y4C5 530 aa6.89□□□□□ -1.31
NIF3L1-209ENST00000454952 ZNF503-AS2A6NEH8 195 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 LYNX1G3V0Z9 82 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 MS4A18H0YCH9 400 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 CLIC1O00299 241 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 UBDO15205 165 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 WIPF1O43516 503 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 MGRN1O60291 552 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 SERPINB7O75635 380 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 SEC14L2O76054 403 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 OR6A2O95222 327 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 BCL10O95999 233 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 HPXP02790 462 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 SERPINA5P05154 406 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 IGFBP1P08833 259 aaPredicted RBP6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 OR8G3PP0DMU2 310 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 LYNX1P0DP58 116 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 SNRPBP14678 240 aaKnown RBP6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 B4GALT1P15291 398 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 EPHA1P21709 976 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 ALDH3B1P43353 468 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 GIPRP48546 466 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 CSNK1A1P48729 337 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 PIGFQ07326 219 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 MS4A18Q3C1V0 323 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 GCNT6Q5T4J0 391 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 RGS7BPQ6MZT1 257 aaPredicted RBP6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 REEP3Q6NUK4 255 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 WDR93Q6P2C0 686 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 TMEM53Q6P2H8 277 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 FAHD2BQ6P2I3 314 aaPredicted RBP6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 DHRS4L2Q6PKH6 230 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 UNQ6126/PRO20091Q6UXV3 157 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 C10orf53Q8N6V4 93 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 CPEB3Q8NE35 698 aaKnown RBP6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 OR1J2Q8NGS2 313 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 ZNF837Q96EG3 531 aaPredicted RBP6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 FAHD2AQ96GK7 314 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 TIMD4Q96H15 378 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 ZNF607Q96SK3 696 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 TMEM43Q9BTV4 400 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 CENPHQ9H3R5 247 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 NARFLQ9H6Q4 476 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 WDR55Q9H6Y2 383 aaPredicted RBP6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 LPAR2Q9HBW0 351 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 HINT3Q9NQE9 182 aaKnown RBP6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 SLC6A13Q9NSD5 602 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 NKIRAS2Q9NYR9 191 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 TREM2Q9NZC2 230 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 DUSP13Q9UII6 198 aa6.88□□□□□ -1.31
NIF3L1-209ENST00000454952 ANK2Q01484 3957 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 IGKV1D-42A0A075B6H8 117 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 C17orf100A8MU93 164 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 PLPP3O14495 311 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 SNNO75324 88 aaPredicted RBP6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 NAT2P11245 290 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 TCN1P20061 433 aaPredicted RBP6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 DRD4P21917 467 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 AHCYP23526 432 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 SLC6A2P23975 617 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 COL8A2P25067 703 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 FPR2P25090 351 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 RAD52P43351 418 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 ARFIP2P53365 341 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 KLF3P57682 345 aaPredicted RBP6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 RGS8P57771 180 aaPredicted RBP6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 STX1BP61266 288 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 LMO4P61968 165 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 HOXC5Q00444 222 aa6.87□□□□□ -1.31
NIF3L1-209ENST00000454952 CDK6Q00534 326 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms