RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ZNF563Q8TA94 476 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 DUSP19Q8WTR2 217 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 SORCS2Q96PQ0 1159 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 RNF32Q9H0A6 362 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 DPAGT1Q9H3H5 408 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 GHITMQ9H3K2 345 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 SLC7A7Q9UM01 511 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 WIF1Q9Y5W5 379 aa14.35□□□□□ -0.11
SNX17-204ENST00000453453 CHCHD2Q9Y6H1 151 aaPredicted RBP14.35□□□□□ -0.11
SNX17-204ENST00000453453 OIP5O43482 229 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 TLX3O43711 291 aaPredicted RBP14.34□□□□□ -0.11
SNX17-204ENST00000453453 RGS9O75916 674 aaPredicted RBP14.34□□□□□ -0.11
SNX17-204ENST00000453453 P04436 131 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 WT1P19544 449 aaPredicted RBP14.34□□□□□ -0.11
SNX17-204ENST00000453453 CAPZA2P47755 286 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 SUMO3P55854 103 aaPredicted RBP14.34□□□□□ -0.11
SNX17-204ENST00000453453 SNRPD2P62316 118 aaKnown RBP14.34□□□□□ -0.11
SNX17-204ENST00000453453 TSPAN31Q12999 210 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 OR2G6Q5TZ20 316 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 GPR139Q6DWJ6 353 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 ULK3Q6PHR2 472 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 CBLN3Q6UW01 205 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 BAIAP2L2Q6UXY1 529 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 IQCF1Q8N6M8 205 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 OR4M2Q8NGB6 313 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 OR5W2Q8NH69 310 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 PAQR8Q8TEZ7 354 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 GATAD2BQ8WXI9 593 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 TM9SF2Q99805 663 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 UTP23Q9BRU9 249 aaKnown RBP14.34□□□□□ -0.11
SNX17-204ENST00000453453 CCDC86Q9H6F5 360 aaKnown RBP14.34□□□□□ -0.11
SNX17-204ENST00000453453 NARFLQ9H6Q4 476 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 KRCC1Q9NPI7 259 aaPredicted RBP14.34□□□□□ -0.11
SNX17-204ENST00000453453 DKK4Q9UBT3 224 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 FKBP7Q9Y680 259 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 HEATR5AQ86XA9 2040 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 SPTBN2O15020 2390 aa14.34□□□□□ -0.11
SNX17-204ENST00000453453 A0A0B4J2E0 115 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 A0A1B0GWA3 101 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 A0A1B0GX12 115 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 FABP7O15540 132 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 C4BPBP20851 252 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 PYHIN1Q6K0P9 492 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 TPRA1Q86W33 373 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 UBE2J2Q8N2K1 259 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 RTN4RQ9BZR6 473 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 HDHD2Q9H0R4 259 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 ZFP64Q9NPA5 681 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 MAN2C1Q9NTJ4 1040 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 EXTL2Q9UBQ6 330 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 ICAM5Q9UMF0 924 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 CACNG2Q9Y698 323 aa14.33□□□□□ -0.11
SNX17-204ENST00000453453 A0A0A6YYJ9 748 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 ANKUB1A6NFN9 424 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 OR7A10O76100 309 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 GP1BBP13224 206 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 AHCYP23526 432 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 AGFG1P52594 562 aaKnown RBP14.33□□□□□ -0.12
SNX17-204ENST00000453453 FCN2Q15485 313 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 DEFB109BQ30KR1 87 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 ALG10BQ5I7T1 473 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 PRAMEF20Q5VT98 475 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 AADACL4Q5VUY2 407 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 FAM205BPQ63HN1 556 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 BCDIN3DQ7Z5W3 292 aaKnown RBP14.33□□□□□ -0.12
SNX17-204ENST00000453453 FGD2Q7Z6J4 655 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 PIGXQ8TBF5 258 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 ACOT11Q8WXI4 607 aaPredicted RBP14.33□□□□□ -0.12
SNX17-204ENST00000453453 TMEM234Q8WY98 164 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 HS6ST2Q96MM7 605 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 ANGPTL4Q9BY76 406 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 ACTR6Q9GZN1 396 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 CLEC4MQ9H2X3 399 aaPredicted RBP14.33□□□□□ -0.12
SNX17-204ENST00000453453 SH2D2AQ9NP31 389 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 MGAT4AQ9UM21 535 aa14.33□□□□□ -0.12
SNX17-204ENST00000453453 CFAP54Q96N23 3096 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 IGLV3-32A0A0A0MS00 114 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 ANKRD61A6NGH8 418 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 RRP8O43159 456 aaKnown RBP14.32□□□□□ -0.12
SNX17-204ENST00000453453 EFSO43281 561 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 GMFGO60234 142 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 ADAM11O75078 769 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 ADRB1P08588 477 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 CCL3P10147 92 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 PNMTP11086 282 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 NPR2P20594 1047 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 PTGDSP41222 190 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 CDH11P55287 796 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 ZNF468Q5VIY5 522 aaPredicted RBP14.32□□□□□ -0.12
SNX17-204ENST00000453453 LINC00696Q6ZRV3 163 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 OAFQ86UD1 273 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 GLCCI1Q86VQ1 547 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 ADGRG3Q86Y34 549 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 OR4K17Q8NGC6 315 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 OSTF1Q92882 214 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 ARSGQ96EG1 525 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 WACQ9BTA9 647 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 OR51J1Q9H342 316 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 PTGES2Q9H7Z7 377 aa14.32□□□□□ -0.12
SNX17-204ENST00000453453 HEXA-AS1Q9H8Q6 139 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms