RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 FXYD6P3P58550 94 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 CEACAM16Q2WEN9 425 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 PHYHD1Q5SRE7 291 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 GPR139Q6DWJ6 353 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 CD300LDQ6UXZ3 194 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 ZNF620Q6ZNG0 422 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 P2RY8Q86VZ1 359 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 HS3ST5Q8IZT8 346 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 SVOPLQ8N434 492 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 ARIH2OSQ8N7S6 290 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 ATG16L2Q8NAA4 619 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 ACBD4Q8NC06 268 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 FAM222BQ8WU58 562 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 S100PBPQ96BU1 408 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 ZNF570Q96NI8 536 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 DACH2Q96NX9 599 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 MUS81Q96NY9 551 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 ERMAPQ96PL5 475 aaPredicted RBP12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 ALKBH3Q96Q83 286 aaPredicted RBP12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 TSPAN32Q96QS1 320 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 RBP7Q96R05 134 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 IFT27Q9BW83 186 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 MRPL13Q9BYD1 178 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 SEMA6AQ9H2E6 1030 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 EGLN3Q9H6Z9 239 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 ZNF226Q9NYT6 803 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 IL20Q9NYY1 176 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 KIF17Q9P2E2 1029 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 POFUT2Q9Y2G5 429 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 HIVEP3Q5T1R4 2406 aa12.86□□□□□ -0.35
NCKIPSD-207ENST00000453349 H3BNX3 289 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 IMPA2O14732 288 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 IDH3BO43837 385 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 QDPRP09417 244 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 APEHP13798 732 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 NOS3P29474 1203 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 SDHAP31040 664 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 HOXC12P31275 282 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 SH3BGRP55822 239 aaPredicted RBP12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 RUNX1T1Q06455 604 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 STK11Q15831 433 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 GABRA6Q16445 453 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 THEM4Q5T1C6 240 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 LINGO2Q7L985 606 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 WDFY1Q8IWB7 410 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 CLDN22Q8N7P3 220 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 SYT14Q8NB59 555 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 C1orf162Q8NEQ5 155 aaPredicted RBP12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 NOXO1Q8NFA2 376 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 ZNF519Q8TB69 540 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 DNAJC9Q8WXX5 260 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 HDAC2Q92769 488 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 MUCL1Q96DR8 90 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 Q96M85 177 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 PKP2Q99959 881 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 ALG12Q9BV10 488 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 TBC1D23Q9NUY8 699 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 CRIM1Q9NZV1 1036 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 KCNN3Q9UGI6 736 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 ADAM18Q9Y3Q7 739 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 CDH10Q9Y6N8 788 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 TENM4Q6N022 2769 aa12.85□□□□□ -0.35
NCKIPSD-207ENST00000453349 TEX13CA0A0J9YWL9 993 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 ZNF99A8MXY4 864 aaPredicted RBP12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 H3BN98 237 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 SOCS2O14508 198 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 AHCYL1O43865 530 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 PPP1R3DO95685 299 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 ZNF84P51523 738 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 ARF1P84077 181 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 MYBPC1Q00872 1141 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 CD47Q08722 323 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 TIMM23BQ5SRD1 257 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 ANKRD16Q6P6B7 361 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 LRFN4Q6PJG9 635 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 KLHL17Q6TDP4 642 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 SSX8Q7RTT4 187 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 FAM122BQ7Z309 247 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 C17orf78Q8N4C9 275 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 ICA1LQ8NDH6 482 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 OR1K1Q8NGR3 316 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 MAGEE2Q8TD90 523 aaPredicted RBP12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 MCHR2Q969V1 340 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 ZC3HAV1LQ96H79 300 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 KCNK17Q96T54 332 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 TSSK6Q9BXA6 273 aa12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 MAGED1Q9Y5V3 778 aaPredicted RBP12.84□□□□□ -0.35
NCKIPSD-207ENST00000453349 INTS1Q8N201 2190 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 OR5H1A6NKK0 313 aa12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 ARPC3O15145 178 aa12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 DHHO43323 396 aa12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 BAG2O95816 211 aa12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 TXNDC12O95881 172 aa12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 OSMP13725 252 aa12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 CCKARP32238 428 aa12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 GUCA1AP43080 201 aaPredicted RBP12.83□□□□□ -0.36
NCKIPSD-207ENST00000453349 KRR1Q13601 381 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms