RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 KRT34O76011 436 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 OR5F1O95221 314 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 IGF2P01344 180 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 MT-ND1P03886 318 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 IGFBP1P08833 259 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-208ENST00000452047 PGA4P0DJD7 388 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 PGA3P0DJD8 388 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 CD79AP11912 226 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF35P13682 527 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 NPR2P20594 1047 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 RBM34P42696 430 aaKnown RBP10.78□□□□□ -0.68
CPSF4-208ENST00000452047 UGT2B15P54855 530 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 PIGFQ07326 219 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 SNTB2Q13425 540 aaKnown RBP10.78□□□□□ -0.68
CPSF4-208ENST00000452047 MELKQ14680 651 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 MSMPQ1L6U9 139 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 LRFN4Q6PJG9 635 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 NANOGNBQ7Z5D8 188 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 NKAIN4Q8IVV8 208 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 SVOPLQ8N434 492 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 PCYOX1LQ8NBM8 494 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 PFN4Q8NHR9 129 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 TMEM255BQ8WV15 326 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 ZNF566Q969W8 418 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 SLC25A44Q96H78 314 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-208ENST00000452047 DOK1Q99704 481 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 VRK1Q99986 396 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-208ENST00000452047 YAE1D1Q9NRH1 226 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 GLTPQ9NZD2 209 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 CAPN7Q9Y6W3 813 aa10.78□□□□□ -0.68
CPSF4-208ENST00000452047 MALRD1Q5VYJ5 2156 aa10.77□□□□□ -0.68
CPSF4-208ENST00000452047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.77□□□□□ -0.696e-9■■■■□ 23
CPSF4-208ENST00000452047 A8MV72 311 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-208ENST00000452047 NDUFS8O00217 210 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 SLC22A2O15244 555 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 TSPAN19P0C672 248 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 IGHV4-31P0DP07 118 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 UMPSP11172 480 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 USF1P22415 310 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-208ENST00000452047 NR4A1P22736 598 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 NR4A2P43354 598 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 OR1E2P47887 323 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 GIPRP48546 466 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 PDLIM4P50479 330 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 TAS2R41P59536 307 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 RPL18Q07020 188 aaKnown RBP10.77□□□□□ -0.69
CPSF4-208ENST00000452047 PIN1Q13526 163 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-208ENST00000452047 DAG1Q14118 895 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 HIST3H3Q16695 136 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 CYBRD1Q53TN4 286 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 KRT80Q6KB66 452 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 DEF8Q6ZN54 512 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 PIWIL3Q7Z3Z3 882 aaKnown RBP10.77□□□□□ -0.69
CPSF4-208ENST00000452047 HIPK1Q86Z02 1210 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 ZNF584Q8IVC4 421 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 SKA3Q8IX90 412 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 OR2T12Q8NG77 320 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 FGFBP3Q8TAT2 258 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 LIPHQ8WWY8 451 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 RCN3Q96D15 328 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 SEPHS2Q99611 448 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 MDFIQ99750 246 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 DENND2DQ9H6A0 471 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-208ENST00000452047 MYOZ1Q9NP98 299 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-208ENST00000452047 C20orf141Q9NUB4 165 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 TMEM38BQ9NVV0 291 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 GID8Q9NWU2 228 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 ARMCX1Q9P291 453 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 RIMS3Q9UJD0 308 aa10.77□□□□□ -0.69
CPSF4-208ENST00000452047 FBXO9Q9UK97 447 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-208ENST00000452047 LOC390937A0A1W2PQ73 354 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 BLOC1S5-TXNDC5H3BN57 136 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 OR7A10O76100 309 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 UBL3O95164 117 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 IFNA14P01570 189 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 HIST1H2ABP04908 130 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 THRBP10828 461 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 KDELR2P33947 212 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 PTDSS1P48651 473 aaKnown RBP10.76□□□□□ -0.69
CPSF4-208ENST00000452047 RAB1AP62820 205 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 RUNX1T1Q06455 604 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 LRRC23Q53EV4 343 aaPredicted RBP10.76□□□□□ -0.69
CPSF4-208ENST00000452047 HIST3H2AQ7L7L0 130 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 SPATA21Q7Z572 469 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 MICU2Q8IYU8 434 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 CDK20Q8IZL9 346 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 ZCCHC24Q8N2G6 241 aaKnown RBP10.76□□□□□ -0.69
CPSF4-208ENST00000452047 SLC22A24Q8N4F4 322 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 POU5F2Q8N7G0 328 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 TMEM239Q8WW34 195 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 ASB10Q8WXI3 467 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 HIST1H2ACQ93077 130 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 FOXN4Q96NZ1 517 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 MRPL13Q9BYD1 178 aaKnown RBP10.76□□□□□ -0.69
CPSF4-208ENST00000452047 CMTM6Q9NX76 183 aa10.76□□□□□ -0.69
CPSF4-208ENST00000452047 GMPR2Q9P2T1 348 aaKnown RBP10.76□□□□□ -0.69
CPSF4-208ENST00000452047 IGHV4-61A0A0C4DH41 118 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 ELOVL7A1L3X0 281 aa10.75□□□□□ -0.69
CPSF4-208ENST00000452047 VSTM5A8MXK1 200 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms