RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	BLOC1S5-TXNDC5	H3BN57	136 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	RPL36A-HNRNPH2	H7BZ11	118 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	LYPD3	O95274	346 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	MT-ATP6	P00846	226 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	IGKV3-15	P01624	115 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	IGLV1-44	P01699	117 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	C8B	P07358	591 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	OR4A8	P0C604	315 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	PATE4	P0C8F1	98 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	CBR1	P16152	277 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	THBS4	P35443	961 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	PTDSS1	P48651	473 aa	Known RBP	7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	EFNA4	P52798	201 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	HGFAC	Q04756	655 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	SNTB2	Q13425	540 aa	Known RBP	7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	MAPRE2	Q15555	327 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	ADIPOQ	Q15848	244 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	ZNF74	Q16587	644 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	MST1L	Q2TV78	715 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	HSP90B2P	Q58FF3	399 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	SLC35D2	Q76EJ3	337 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	SPATA21	Q7Z572	469 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	NANOGNB	Q7Z5D8	188 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	PXK	Q7Z7A4	578 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	SVOPL	Q8N434	492 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	OR10H5	Q8NGA6	315 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	OR6S1	Q8NH40	331 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	PFN4	Q8NHR9	129 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	C10orf82	Q8WW14	230 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	RCN3	Q96D15	328 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	ZNF317	Q96PQ6	595 aa	Predicted RBP	7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	SH3GL1	Q99961	368 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	EVA1A	Q9H8M9	152 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	CRNN	Q9UBG3	495 aa	Predicted RBP	7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	ADAM21	Q9UKJ8	722 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	CAPN7	Q9Y6W3	813 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	CUBN	O60494	3623 aa		7.52	□□□□□ -1.21
RFX3-209	ENST00000451859	IGHV2OR16-5	A0A0B4J2B6	119 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	BBIP1	A8MTZ0	92 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	hCG_2039718	K7EN88	272 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	CD5L	O43866	347 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	PIP5K1C	O60331	668 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	RAB36	O95755	333 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	HIST1H2AB	P04908	130 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	F13B	P05160	661 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	SLC25A16	P16260	332 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	ZNF16	P17020	682 aa	Predicted RBP	7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	ARR3	P36575	388 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	GIPR	P48546	466 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	UGT2B15	P54855	530 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	DSCR9	P59020	149 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	MYBPC1	Q00872	1141 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	DAG1	Q14118	895 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	GGTLC2	Q14390	218 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	SWI5	Q1ZZU3	235 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	GSG1	Q2KHT4	349 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	TMEM249	Q2WGJ8	235 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	CYBRD1	Q53TN4	286 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	C1QTNF12	Q5T7M4	302 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	CCDC80	Q76M96	950 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	HIST3H2A	Q7L7L0	130 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	CALHM3	Q86XJ0	350 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	MEX3D	Q86XN8	651 aa	Known RBP	7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	NKAIN4	Q8IVV8	208 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	ZCCHC24	Q8N2G6	241 aa	Known RBP	7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	PCYOX1L	Q8NBM8	494 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	OR4F15	Q8NGB8	312 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	OR8J3	Q8NGG0	315 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	C10orf105	Q8TEF2	133 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	TMEM255B	Q8WV15	326 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	RASSF5	Q8WWW0	418 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	HIST1H2AC	Q93077	130 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	BOD1	Q96IK1	185 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	MPP4	Q96JB8	637 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	FOXB1	Q99853	325 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	PRSS27	Q9BQR3	290 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	OR51B6	Q9H340	312 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	DYNLRB1	Q9NP97	96 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	MEPE	Q9NQ76	525 aa	Predicted RBP	7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	GID8	Q9NWU2	228 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	TAS2R5	Q9NYW4	299 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	GLTP	Q9NZD2	209 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	BAG5	Q9UL15	447 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859	FZR1	Q9UM11	496 aa		7.51	□□□□□ -1.21
RFX3-209	ENST00000451859		A0A096LNT2	108 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	FAM220BP	B1ANY3	271 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859		B9A039	149 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	MCIDAS	D6RGH6	385 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	TLX2	O43763	284 aa	Predicted RBP	7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	CRLF1	O75462	422 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	CSF3	P09919	207 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	FUT1	P19526	365 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	NPR2	P20594	1047 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	AQP2	P41181	271 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	YAP1	P46937	504 aa	Known RBP	7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	PDLIM4	P50479	330 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	CLRN1	P58418	232 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	RAB1A	P62820	205 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	GALK2	Q01415	458 aa		7.5	□□□□□ -1.21
RFX3-209	ENST00000451859	RPL18	Q07020	188 aa	Known RBP	7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms