RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 DPP10Q8N608 796 aa23.37■■□□□ 1.33
USP42-204ENST00000451154 VANGL1Q8TAA9 524 aaPredicted RBP23.37■■□□□ 1.33
USP42-204ENST00000451154 MRPL24Q96A35 216 aaKnown RBP23.37■■□□□ 1.33
USP42-204ENST00000451154 TAS2R5Q9NYW4 299 aa23.37■■□□□ 1.33
USP42-204ENST00000451154 SPEF1Q9Y4P9 236 aa23.37■■□□□ 1.33
USP42-204ENST00000451154 TACSTD2P09758 323 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 CHN2P52757 468 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 RIN1Q13671 783 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 RAB39AQ14964 217 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 CR1LQ2VPA4 569 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 SLC35D2Q76EJ3 337 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 SKA3Q8IX90 412 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 LRRC17Q8N6Y2 441 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 FGFBP3Q8TAT2 258 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 SNX18Q96RF0 628 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 SYT3Q9BQG1 590 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 INTS9Q9NV88 658 aaKnown RBP23.36■■□□□ 1.33
USP42-204ENST00000451154 GLTPQ9NZD2 209 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 REV1Q9UBZ9 1251 aa23.36■■□□□ 1.33
USP42-204ENST00000451154 ANGPT2O15123 496 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 SYNGR3O43761 229 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 RAB36O95755 333 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 TCN1P20061 433 aaPredicted RBP23.35■■□□□ 1.33
USP42-204ENST00000451154 HNF1AP20823 631 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 APEX1P27695 318 aaKnown RBP23.35■■□□□ 1.33
USP42-204ENST00000451154 EVX1P49640 407 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 TRIP10Q15642 601 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 ZNF74Q16587 644 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 GKAP1Q5VSY0 366 aaPredicted RBP23.35■■□□□ 1.33
USP42-204ENST00000451154 TTC33Q6PID6 262 aaPredicted RBP23.35■■□□□ 1.33
USP42-204ENST00000451154 TSPYL5Q86VY4 417 aaPredicted RBP23.35■■□□□ 1.33
USP42-204ENST00000451154 LRP11Q86VZ4 500 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 OR6X1Q8NH79 312 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 ADAMTS16Q8TE57 1224 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 TMEM54Q969K7 222 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 ZNF385DQ9H6B1 395 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 KAT8Q9H7Z6 458 aaKnown RBP23.35■■□□□ 1.33
USP42-204ENST00000451154 SLC7A7Q9UM01 511 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 FZR1Q9UM11 496 aa23.35■■□□□ 1.33
USP42-204ENST00000451154 KPNA4O00629 521 aaPredicted RBP23.34■■□□□ 1.33
USP42-204ENST00000451154 GLRXP35754 106 aa23.34■■□□□ 1.33
USP42-204ENST00000451154 ZP4Q12836 540 aa23.34■■□□□ 1.33
USP42-204ENST00000451154 NFYCQ13952 458 aa23.34■■□□□ 1.33
USP42-204ENST00000451154 LRFN4Q6PJG9 635 aa23.34■■□□□ 1.33
USP42-204ENST00000451154 PIWIL3Q7Z3Z3 882 aaKnown RBP23.34■■□□□ 1.33
USP42-204ENST00000451154 DENND2DQ9H6A0 471 aaPredicted RBP23.34■■□□□ 1.33
USP42-204ENST00000451154 NANSQ9NR45 359 aa23.34■■□□□ 1.33
USP42-204ENST00000451154 RNF13O43567 381 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 UBL3O95164 117 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 CD247P20963 164 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 ALDH3B1P43353 468 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 SEC24CP53992 1094 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 GALK2Q01415 458 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 MELKQ14680 651 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 FXNQ16595 210 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 OR10A6Q8NH74 314 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 HPS1Q92902 700 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 TAMM41Q96BW9 452 aa23.33■■□□□ 1.33
USP42-204ENST00000451154 TRAPPC13A5PLN9 417 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 HIST1H2ABP04908 130 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 MAD2L1BPQ15013 274 aaPredicted RBP23.32■■□□□ 1.32
USP42-204ENST00000451154 HIST3H2AQ7L7L0 130 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 PATL1Q86TB9 770 aaKnown RBP23.32■■□□□ 1.32
USP42-204ENST00000451154 ZNF584Q8IVC4 421 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 SLC22A24Q8N4F4 322 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 LINC01356Q8N9X3 169 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 SLC26A7Q8TE54 656 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 HIST1H2ACQ93077 130 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 ZNF566Q969W8 418 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 MAGEB18Q96M61 343 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 SH3GL3Q99963 347 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 MYEF2Q9P2K5 600 aaKnown RBP23.32■■□□□ 1.32
USP42-204ENST00000451154 TRIM33Q9UPN9 1127 aa23.32■■□□□ 1.32
USP42-204ENST00000451154 M0R233 179 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 SERPINA5P05154 406 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 COL8A2P25067 703 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 PCGF2P35227 344 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 ELFN2Q5R3F8 820 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 SLC30A8Q8IWU4 369 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 STON2Q8WXE9 905 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 SLC25A44Q96H78 314 aaPredicted RBP23.31■■□□□ 1.32
USP42-204ENST00000451154 C19orf24Q9BVV8 132 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 MS4A5Q9H3V2 200 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 NPHS2Q9NP85 383 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 DUSP13Q9UII6 198 aa23.31■■□□□ 1.32
USP42-204ENST00000451154 HPXP02790 462 aa23.3■■□□□ 1.32
USP42-204ENST00000451154 OR8G3PP0DMU2 310 aa23.3■■□□□ 1.32
USP42-204ENST00000451154 UMPSP11172 480 aa23.3■■□□□ 1.32
USP42-204ENST00000451154 GZMMP51124 257 aa23.3■■□□□ 1.32
USP42-204ENST00000451154 CCNIQ14094 377 aa23.3■■□□□ 1.32
USP42-204ENST00000451154 TSPEARQ8WU66 669 aa23.3■■□□□ 1.32
USP42-204ENST00000451154 TMEM38BQ9NVV0 291 aa23.3■■□□□ 1.32
USP42-204ENST00000451154 TMEFF2Q9UIK5 374 aaPredicted RBP23.3■■□□□ 1.32
USP42-204ENST00000451154 ZNF229Q9UJW7 825 aa23.3■■□□□ 1.32
USP42-204ENST00000451154 FBXL3Q9UKT7 428 aa23.3■■□□□ 1.32
USP42-204ENST00000451154 DHHO43323 396 aa23.29■■□□□ 1.32
USP42-204ENST00000451154 QDPRP09417 244 aa23.29■■□□□ 1.32
USP42-204ENST00000451154 ASAH2BP0C7U1 165 aa23.29■■□□□ 1.32
USP42-204ENST00000451154 CRYBA2P53672 197 aa23.29■■□□□ 1.32
USP42-204ENST00000451154 CARM1Q86X55 608 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms