RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 TRAV27A0A087WT01 109 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 ZNF99A8MXY4 864 aaPredicted RBP12.58□□□□□ -0.4
COL3A1-203ENST00000450867 SERPINI2O75830 405 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 FPR3P25089 353 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 GSSP48637 474 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 CSNK1A1P48729 337 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 FXYD6P3P58550 94 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 RPL27P61353 136 aaKnown RBP12.58□□□□□ -0.4
COL3A1-203ENST00000450867 MELKQ14680 651 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 CEACAM16Q2WEN9 425 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 NCMAPQ5T1S8 102 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 FAM205BPQ63HN1 556 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 OR2T5Q6IEZ7 315 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 ZNF770Q6IQ21 691 aaPredicted RBP12.58□□□□□ -0.4
COL3A1-203ENST00000450867 C1orf94Q6P1W5 598 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 MEX3DQ86XN8 651 aaKnown RBP12.58□□□□□ -0.4
COL3A1-203ENST00000450867 NOXO1Q8NFA2 376 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 OR2T29Q8NH02 315 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 OR51A7Q8NH64 312 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 ZNF519Q8TB69 540 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 CANT1Q8WVQ1 401 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 ZNF566Q969W8 418 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 NMD3Q96D46 503 aaKnown RBP12.58□□□□□ -0.4
COL3A1-203ENST00000450867 ZNF837Q96EG3 531 aaPredicted RBP12.58□□□□□ -0.4
COL3A1-203ENST00000450867 RSRC1Q96IZ7 334 aaKnown RBP12.58□□□□□ -0.4
COL3A1-203ENST00000450867 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 KCNK17Q96T54 332 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 GPA33Q99795 319 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 GLTPQ9NZD2 209 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 TMCC3Q9ULS5 477 aa12.58□□□□□ -0.4
COL3A1-203ENST00000450867 MAGED1Q9Y5V3 778 aaPredicted RBP12.58□□□□□ -0.4
COL3A1-203ENST00000450867 M0R3G1 203 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 IGHG1P01857 330 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 ACADSP16219 412 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 IFNGR2P38484 337 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 ARF1P84077 181 aaKnown RBP12.57□□□□□ -0.4
COL3A1-203ENST00000450867 TBRG1Q3YBR2 411 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 C10orf128Q5T292 105 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 C9orf135Q5VTT2 229 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 PGBD2Q6P3X8 592 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 LRFN4Q6PJG9 635 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 FAM122BQ7Z309 247 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 CCDC36Q8IYA8 594 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 FAM169BQ8N8A8 192 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 OR6N1Q8NGY5 312 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 PIK3IP1Q96FE7 263 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 PLPPR2Q96GM1 343 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 ULBP2Q9BZM5 246 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 ESRP2Q9H6T0 727 aaKnown RBP12.57□□□□□ -0.4
COL3A1-203ENST00000450867 SMURF2Q9HAU4 748 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 MOV10Q9HCE1 1003 aaKnown RBP12.57□□□□□ -0.4
COL3A1-203ENST00000450867 NRIP3Q9NQ35 241 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 VNN3Q9NY84 501 aa12.57□□□□□ -0.4
COL3A1-203ENST00000450867 MAP1AP78559 2803 aaPredicted RBP12.57□□□□□ -0.4
COL3A1-203ENST00000450867 UNC119BA6NIH7 251 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 MCIDASD6RGH6 385 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 TNFRSF11BO00300 401 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 OR10H3O60404 316 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 TRMUO75648 421 aaKnown RBP12.56□□□□□ -0.4
COL3A1-203ENST00000450867 NDUFB2O95178 105 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 WNT11O96014 354 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 CD14P08571 375 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 NR2C1P13056 603 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 APEHP13798 732 aaKnown RBP12.56□□□□□ -0.4
COL3A1-203ENST00000450867 CTXN1P60606 82 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 RUNX1T1Q06455 604 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 TSPAN31Q12999 210 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 NRN1LQ496H8 165 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 HIKESHIQ53FT3 197 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 CARD17Q5XLA6 110 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 ADAM5Q6NVV9 412 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 CCDC121Q6ZUS5 278 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 SPATA24Q86W54 205 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 ARIH2OSQ8N7S6 290 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 OR52N5Q8NH56 324 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 FNDC8Q8TC99 324 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 DUS3LQ96G46 650 aaKnown RBP12.56□□□□□ -0.4
COL3A1-203ENST00000450867 TSPAN32Q96QS1 320 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 ALG12Q9BV10 488 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 CHID1Q9BWS9 393 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 NDEL1Q9GZM8 345 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 CCM2LQ9NUG4 571 aaPredicted RBP12.56□□□□□ -0.4
COL3A1-203ENST00000450867 CRNNQ9UBG3 495 aaPredicted RBP12.56□□□□□ -0.4
COL3A1-203ENST00000450867 AURKCQ9UQB9 309 aa12.56□□□□□ -0.4
COL3A1-203ENST00000450867 ARRDC5A6NEK1 342 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 DPRXA6NFQ7 191 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 A6NIZ1 184 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 EBAG9O00559 213 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 DHHO43323 396 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 AHCYL1O43865 530 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 TXNDC12O95881 172 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 HOXC12P31275 282 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 RAP1BP61224 184 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 RAP1AP62834 184 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 BSPH1Q075Z2 132 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 GPR139Q6DWJ6 353 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 SMARCD3Q6STE5 483 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 THSD4Q6ZMP0 1018 aa12.55□□□□□ -0.4
COL3A1-203ENST00000450867 HDAC2Q92769 488 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms