RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 REP15Q6BDI9 236 aa19.01■□□□□ 0.63
CPSF7-208ENST00000450000 DEF8Q6ZN54 512 aa19.01■□□□□ 0.63
CPSF7-208ENST00000450000 PIWIL3Q7Z3Z3 882 aaKnown RBP19.01■□□□□ 0.63
CPSF7-208ENST00000450000 MYPOPQ86VE0 399 aaPredicted RBP19.01■□□□□ 0.63
CPSF7-208ENST00000450000 CARM1Q86X55 608 aa19.01■□□□□ 0.63
CPSF7-208ENST00000450000 OR4D11Q8NGI4 311 aa19.01■□□□□ 0.63
CPSF7-208ENST00000450000 FGFR1OP2Q9NVK5 253 aa19.01■□□□□ 0.63
CPSF7-208ENST00000450000 A0A096LNT2 108 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 LOC100653049A0A140TA62 436 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 A0A1W2PRG6 482 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 ZNF503-AS2A6NEH8 195 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 FBP2O00757 339 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 KRT34O76011 436 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 NR4A2P43354 598 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 GIPRP48546 466 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 CLRN1P58418 232 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 RPS23P62266 143 aaKnown RBP19■□□□□ 0.63
CPSF7-208ENST00000450000 KLF10Q13118 480 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 MELKQ14680 651 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 HSP90B2PQ58FF3 399 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 WDR88Q6ZMY6 472 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 SLC25A44Q96H78 314 aaPredicted RBP19■□□□□ 0.63
CPSF7-208ENST00000450000 FOXN4Q96NZ1 517 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 RNF121Q9H920 327 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 B3GNT2Q9NY97 397 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 LPAR3Q9UBY5 353 aa19■□□□□ 0.63
CPSF7-208ENST00000450000 SASH3O75995 380 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 IGHG1P01857 330 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 OR8G3PP0DMU2 310 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 DAOP14920 347 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 NR4A1P22736 598 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 LRRC23Q53EV4 343 aaPredicted RBP18.99■□□□□ 0.63
CPSF7-208ENST00000450000 ZNF627Q7L945 461 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 HDDC2Q7Z4H3 204 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 LRRC17Q8N6Y2 441 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 TMEM54Q969K7 222 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 MS4A3Q96HJ5 214 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 MDFIQ99750 246 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 POLR2J2Q9GZM3 115 aaKnown RBP18.99■□□□□ 0.63
CPSF7-208ENST00000450000 SHARPINQ9H0F6 387 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 PCDHAC1Q9H158 963 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 POLR2J3Q9H1A7 115 aaKnown RBP18.99■□□□□ 0.63
CPSF7-208ENST00000450000 TAS2R5Q9NYW4 299 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 KCNS2Q9ULS6 477 aa18.99■□□□□ 0.63
CPSF7-208ENST00000450000 THY1P04216 161 aa18.98■□□□□ 0.63
CPSF7-208ENST00000450000 ADRA2AP08913 450 aa18.98■□□□□ 0.63
CPSF7-208ENST00000450000 IGHV4-31P0DP07 118 aa18.98■□□□□ 0.63
CPSF7-208ENST00000450000 ZNF16P17020 682 aaPredicted RBP18.98■□□□□ 0.63
CPSF7-208ENST00000450000 GZMMP51124 257 aa18.98■□□□□ 0.63
CPSF7-208ENST00000450000 ZNF84P51523 738 aa18.98■□□□□ 0.63
CPSF7-208ENST00000450000 TMEM53Q6P2H8 277 aa18.98■□□□□ 0.63
CPSF7-208ENST00000450000 SGTBQ96EQ0 304 aa18.98■□□□□ 0.63
CPSF7-208ENST00000450000 DOK1Q99704 481 aa18.98■□□□□ 0.63
CPSF7-208ENST00000450000 CAPN7Q9Y6W3 813 aa18.98■□□□□ 0.63
CPSF7-208ENST00000450000 ABCA1O95477 2261 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 LOC100289279A0A1B0GTE1 492 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 DHHO43323 396 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 LMX1BO60663 402 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 OR5F1O95221 314 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 MT-ND1P03886 318 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 QDPRP09417 244 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 FUT1P19526 365 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 RBM34P42696 430 aaKnown RBP18.97■□□□□ 0.63
CPSF7-208ENST00000450000 DAP3P51398 398 aaKnown RBP18.97■□□□□ 0.63
CPSF7-208ENST00000450000 RAB39AQ14964 217 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 FAM166AQ6J272 317 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 NHLRC1Q6VVB1 395 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 SLC22A24Q8N4F4 322 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 C10orf82Q8WW14 230 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 LZICQ8WZA0 190 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 TPD52L3Q96J77 140 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 KCNN2Q9H2S1 579 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 CHODLQ9H9P2 273 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 SAR1AQ9NR31 198 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 STX18Q9P2W9 335 aaKnown RBP18.97■□□□□ 0.63
CPSF7-208ENST00000450000 RIMS3Q9UJD0 308 aa18.97■□□□□ 0.63
CPSF7-208ENST00000450000 M0R233 179 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 SHOX2O60902 331 aaPredicted RBP18.96■□□□□ 0.63
CPSF7-208ENST00000450000 LYPD3O95274 346 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 PTHP01270 115 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 ASAH2BP0C7U1 165 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 ZNF14P17017 642 aaPredicted RBP18.96■□□□□ 0.63
CPSF7-208ENST00000450000 TNFRSF1BP20333 461 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 GLRXP35754 106 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 SELENOVP59797 346 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 SLC36A2Q495M3 483 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 CXXC5Q7LFL8 322 aaKnown RBP18.96■□□□□ 0.63
CPSF7-208ENST00000450000 DPPA2Q7Z7J5 298 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 CALHM3Q86XJ0 350 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 SKA3Q8IX90 412 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 CDK20Q8IZL9 346 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 OR2T12Q8NG77 320 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 UBASH3BQ8TF42 649 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 TMEM239Q8WW34 195 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 MRPL24Q96A35 216 aaKnown RBP18.96■□□□□ 0.63
CPSF7-208ENST00000450000 BPESC1Q9GZL8 116 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 LRMDAQ9H2I8 198 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 MS4A5Q9H3V2 200 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 INIPQ9NRY2 104 aa18.96■□□□□ 0.63
CPSF7-208ENST00000450000 TMEM160Q9NX00 188 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms