RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TMEM81Q6P7N7 255 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 ZNF676Q8N7Q3 588 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 THRSPQ92748 146 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 ELSPBP1Q96BH3 223 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 SIPA1Q96FS4 1042 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 C1QTNF6Q9BXI9 259 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 SEMA4CQ9C0C4 833 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 FAM60AQ9NP50 221 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 MED11Q9P086 117 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 MRPS33Q9Y291 106 aaKnown RBP17.33■□□□□ 0.36
SDCBP-204ENST00000447182 F5H5P2 479 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 YPEL5P62699 121 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 MAT1AQ00266 395 aaKnown RBP17.32■□□□□ 0.36
SDCBP-204ENST00000447182 SSBP1Q04837 148 aaKnown RBP17.32■□□□□ 0.36
SDCBP-204ENST00000447182 DMWDQ09019 674 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 FUT7Q11130 342 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 NNATQ16517 81 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 C2orf68Q2NKX9 166 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 FNDC7Q5VTL7 733 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 OIT3Q8WWZ8 545 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 TOE1Q96GM8 510 aaKnown RBP17.32■□□□□ 0.36
SDCBP-204ENST00000447182 DGAT2Q96PD7 388 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 SRA1Q9HD15 236 aaKnown RBP17.32■□□□□ 0.36
SDCBP-204ENST00000447182 PFDN2Q9UHV9 154 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 IKZF2Q9UKS7 526 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 CLDN16Q9Y5I7 305 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 TMEM14AQ9Y6G1 99 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 ATG2AQ2TAZ0 1938 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 A0A1B0GTH9 108 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 AQP8O94778 261 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 AKAIN1P0CW23 69 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 PPP1CAP62136 330 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 ALKAL2Q6UX46 152 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 NUP54Q7Z3B4 507 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 OOSP2Q86WS3 158 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 MUC20Q8N307 709 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-204ENST00000447182 C10orf53Q8N6V4 93 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 OR10AC1Q8NH08 325 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 LPAR4Q99677 370 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 ARL6Q9H0F7 186 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 ALX4Q9H161 411 aaPredicted RBP17.32■□□□□ 0.36
SDCBP-204ENST00000447182 OR10A5Q9H207 317 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 GRHPRQ9UBQ7 328 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 GLS2Q9UI32 602 aa17.32■□□□□ 0.36
SDCBP-204ENST00000447182 YBX2Q9Y2T7 364 aaKnown RBP17.32■□□□□ 0.36
SDCBP-204ENST00000447182 A8MUA0 341 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 H0YC42 278 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 PHYHO14832 338 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 LPLP06858 475 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 CTSBP07858 339 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 FGF2P09038 288 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 ZNF35P13682 527 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 CTRB1P17538 263 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 GMFBP60983 142 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 EGR4Q05215 589 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 SRSF5Q13243 272 aaKnown RBP17.31■□□□□ 0.36
SDCBP-204ENST00000447182 GK2Q14410 553 aaPredicted RBP17.31■□□□□ 0.36
SDCBP-204ENST00000447182 MESTQ5EB52 335 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 CTRB2Q6GPI1 263 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 GSG1LQ6UXU4 331 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 KRT77Q7Z794 578 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 PRSS35Q8N3Z0 413 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 OR4D10Q8NGI6 311 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 OR6M1Q8NGM8 313 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 COQ8AQ8NI60 647 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 GPBAR1Q8TDU6 330 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 FGF14Q92915 247 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 DCBLD2Q96PD2 775 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 SLC17A5Q9NRA2 495 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 ERVK-19Q9WJR5 959 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 CDH23Q9H251 3354 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 SPTBP11277 2137 aa17.31■□□□□ 0.36
SDCBP-204ENST00000447182 KIAA0100Q14667 2235 aaKnown RBP17.3■□□□□ 0.36
SDCBP-204ENST00000447182 A0A0A6YYC8 382 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-204ENST00000447182 TVP23AA6NH52 213 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 I3L1I5 382 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-204ENST00000447182 AKR7A3O95154 331 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 SIX6O95475 246 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 RLN1P04808 185 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 F13BP05160 661 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 MELTFP08582 738 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 NAGAP17050 411 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 PRTGQ2VWP7 1150 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 EEF1A1P5Q5VTE0 462 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 OR7E24Q6IFN5 339 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 FDX2Q6P4F2 183 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 PARM1Q6UWI2 310 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 EIF4E3Q8N5X7 224 aaKnown RBP17.3■□□□□ 0.36
SDCBP-204ENST00000447182 ZNF615Q8N8J6 731 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 OR51A4Q8NGJ6 313 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 OR6N2Q8NGY6 317 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 C4orf45Q96LM5 186 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 TTYH1Q9H313 450 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-204ENST00000447182 SEMA6CQ9H3T2 930 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 EXOSC3Q9NQT5 275 aaKnown RBP17.3■□□□□ 0.36
SDCBP-204ENST00000447182 PRTFDC1Q9NRG1 225 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 KIR2DS5A0A0G2JLQ3 304 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 A0A0G2JNG1 304 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 TTLL8A6PVC2 850 aa17.3■□□□□ 0.36
SDCBP-204ENST00000447182 KIR2DS3K7RE56 304 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms