RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-209	ENST00000446764	LCN8	Q6JVE9	175 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	LRFN4	Q6PJG9	635 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	SPNS3	Q6ZMD2	512 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	ZNF627	Q7L945	461 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	DHFR2	Q86XF0	187 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	LURAP1L	Q8IV03	231 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	OR52J3	Q8NH60	311 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	IGFBPL1	Q8WX77	278 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	FBXW5	Q969U6	566 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	SEPHS2	Q99611	448 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	THTPA	Q9BU02	230 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	MRPL13	Q9BYD1	178 aa	Known RBP	18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	TMEM5	Q9Y2B1	443 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	AKAP9	Q99996	3911 aa		18.19	■□□□□ 0.5
GARNL3-209	ENST00000446764	OTOG	Q6ZRI0	2925 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	IGHV1-18	A0A0C4DH31	117 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	NPIPB13	A6NJU9	1138 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	NPIPB4	C9JG80	1138 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	TRMU	O75648	421 aa	Known RBP	18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	ACADS	P16219	412 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	OMP	P47874	163 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	SMIM11A	P58511	58 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	SPIB	Q01892	262 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	HIST3H3	Q16695	136 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	MTX3	Q5HYI7	312 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	SLC22A25	Q6T423	547 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	ZNF813	Q6ZN06	617 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	IGFN1	Q86VF2	1251 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	ZDHHC21	Q8IVQ6	265 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	OR4K5	Q8NGD3	323 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	FAM46A	Q96IP4	442 aa	Known RBP	18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	ZNF347	Q96SE7	839 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	FOXB1	Q99853	325 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	TXNIP	Q9H3M7	391 aa		18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	CISD1	Q9NZ45	108 aa	Known RBP	18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	CRNN	Q9UBG3	495 aa	Predicted RBP	18.18	■□□□□ 0.5
GARNL3-209	ENST00000446764	ZNF503-AS2	A6NEH8	195 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	CENPBD1	B2RD01	187 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	GADD45G	O95257	159 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	QDPR	P09417	244 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	LIMS1	P48059	325 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	CDH11	P55287	796 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	CLRN1	P58418	232 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	CTXN1	P60606	82 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	PIWIL3	Q7Z3Z3	882 aa	Known RBP	18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	HDDC2	Q7Z4H3	204 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	CCDC36	Q8IYA8	594 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	FAM169B	Q8N8A8	192 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	NOXO1	Q8NFA2	376 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	SMAP2	Q8WU79	429 aa	Predicted RBP	18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	ASB9	Q96DX5	294 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	SLC38A2	Q96QD8	506 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	ZNF346	Q9UL40	294 aa	Known RBP	18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	ABCA4	P78363	2273 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	SPG11	Q96JI7	2443 aa		18.17	■□□□□ 0.5
GARNL3-209	ENST00000446764	SH3PXD2B	A1X283	911 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	DHH	O43323	396 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	SMPD2	O60906	423 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	IGLV1-44	P01699	117 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	IGHM	P01871	453 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	SOD3	P08294	240 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	DANCR	P0C864	163 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	B4GALT1	P15291	398 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	CBR1	P16152	277 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	ZNF26	P17031	533 aa	Predicted RBP	18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	RRM2	P31350	389 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	TOP3A	Q13472	1001 aa	Predicted RBP	18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	TAF11	Q15544	211 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	C3orf36	Q3SXR2	165 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	ZBED5	Q49AG3	693 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	DEPDC4	Q8N2C3	294 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	SYT14	Q8NB59	555 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	HDAC2	Q92769	488 aa	Known RBP	18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	MCHR2	Q969V1	340 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	CCDC124	Q96CT7	223 aa	Known RBP	18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	MOV10	Q9HCE1	1003 aa	Known RBP	18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	STX18	Q9P2W9	335 aa	Known RBP	18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	LAMP3	Q9UQV4	416 aa		18.16	■□□□□ 0.5
GARNL3-209	ENST00000446764	CREBBP	Q92793	2442 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764		E7EQL1	145 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	ACOT8	O14734	319 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	GYG2	O15488	501 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	PTP4A3	O75365	173 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	IGKV3-15	P01624	115 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	HLA-H	P01893	362 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	CAPZA2	P47755	286 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	RPL27	P61353	136 aa	Known RBP	18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	MYBPC1	Q00872	1141 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	PGGHG	Q32M88	737 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	DNAL1	Q4LDG9	190 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	B3GLCT	Q6Y288	498 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	MDP1	Q86V88	176 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	TMEM171	Q8WVE6	324 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	TSPAN32	Q96QS1	320 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	GPA33	Q99795	319 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	KRCC1	Q9NPI7	259 aa	Predicted RBP	18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	B3GNT2	Q9NY97	397 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	POU2F3	Q9UKI9	436 aa		18.15	■□□□□ 0.5
GARNL3-209	ENST00000446764	MOK	Q9UQ07	419 aa		18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms