RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 UEVLDQ8IX04 471 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 TMEM99Q8N816 258 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
TOP3B-210ENST00000444502 TM9SF4Q92544 642 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 RFT1Q96AA3 541 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 DDIT4LQ96D03 193 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 THOC3Q96J01 351 aaKnown RBP9.69□□□□□ -0.86
TOP3B-210ENST00000444502 OR2A5Q96R48 311 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 ZNF879B4DU55 563 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 DPM1O60762 260 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 NR2C1P13056 603 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 SSR4P51571 173 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 PLP2Q04941 152 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 RASGEF1BQ0VAM2 473 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 ARHGAP11BQ3KRB8 267 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 MANEAQ5SRI9 462 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 LRRC69Q6ZNQ3 347 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 C12orf45Q8N5I9 185 aaPredicted RBP9.69□□□□□ -0.86
TOP3B-210ENST00000444502 OR4D10Q8NGI6 311 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 OR2T4Q8NH00 348 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 LRRC46Q96FV0 321 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 NMNAT3Q96T66 252 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 RBFOX1Q9NWB1 397 aaKnown RBP9.69□□□□□ -0.86
TOP3B-210ENST00000444502 LILRA5A6NI73 299 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 FAM25EA8MYX2 175 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 CYB5AP00167 134 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 IFNA6P05013 189 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 ZGLP1P0C6A0 271 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 PEBP1P30086 187 aaKnown RBP9.69□□□□□ -0.86
TOP3B-210ENST00000444502 CLDN6P56747 220 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 ACTC1P68032 377 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 ACTA1P68133 377 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 ADAM8P78325 824 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 FOXC1Q12948 553 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 SSX1Q16384 188 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 KCTD18Q6PI47 426 aaPredicted RBP9.69□□□□□ -0.86
TOP3B-210ENST00000444502 ZNF627Q7L945 461 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 TRMT10AQ8TBZ6 339 aaKnown RBP9.69□□□□□ -0.86
TOP3B-210ENST00000444502 ADAMTS14Q8WXS8 1223 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 GPA33Q99795 319 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 C7orf50Q9BRJ6 194 aaKnown RBP9.69□□□□□ -0.86
TOP3B-210ENST00000444502 KATNB1Q9BVA0 655 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 RXFP3Q9NSD7 469 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 TESQ9UGI8 421 aaKnown RBP9.69□□□□□ -0.86
TOP3B-210ENST00000444502 MMACHCQ9Y4U1 282 aa9.69□□□□□ -0.86
TOP3B-210ENST00000444502 TEX13CA0A0J9YWL9 993 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 FAM166BA8MTA8 275 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 SMAD9O15198 467 aaKnown RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 OR2T1O43869 369 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 SLC16A7O60669 478 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 TBX19O60806 448 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 SPDEFO95238 335 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 RLN2P04090 185 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 HOXD4P09016 255 aaPredicted RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 PNMTP11086 282 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 POU3F2P20265 443 aaPredicted RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 S1PR1P21453 382 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 GABRA5P31644 462 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 ADH7P40394 386 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 AQP2P41181 271 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 E2F1Q01094 437 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 ARFRP1Q13795 201 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 C6orf15Q6UXA7 325 aaPredicted RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 RNF170Q96K19 258 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 UTP23Q9BRU9 249 aaKnown RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 ZNF436Q9C0F3 470 aaPredicted RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 DUSP22Q9NRW4 184 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 LUZP4Q9P127 313 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 GLS2Q9UI32 602 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 KCND3Q9UK17 655 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 A0A1B0GVI7 797 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 PRAMEF27A3QJZ7 478 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 KRBOX1C9JBD0 128 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 BET1O15155 118 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 MAS1P04201 325 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 CLUP10909 449 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 PIPP12273 146 aaPredicted RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 DPP4P27487 766 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 SLC6A8P48029 635 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 ZNF84P51523 738 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 DMWDQ09019 674 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 ZIC1Q15915 447 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 NTRK2Q16620 822 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 HYAL4Q2M3T9 481 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 WBP2NLQ6ICG8 309 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 NLRC3Q7RTR2 1065 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 TSEN54Q7Z6J9 526 aaKnown RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 MS4A15Q8N5U1 240 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 ZNF454Q8N9F8 522 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 OR8D4Q8NGM9 314 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 OR4Q3Q8NH05 313 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 OR1L3Q8NH93 324 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 ARL5BQ96KC2 179 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 CDC6Q99741 560 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 NXT1Q9UKK6 140 aaKnown RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 ADAM18Q9Y3Q7 739 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 NPFFR2Q9Y5X5 522 aa9.68□□□□□ -0.86
TOP3B-210ENST00000444502 MDC1Q14676 2089 aaKnown RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 KDM4EB2RXH2 506 aaPredicted RBP9.68□□□□□ -0.86
TOP3B-210ENST00000444502 C4orf51C9J302 202 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms