RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ALKBH2Q6NS38 261 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 C1orf94Q6P1W5 598 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 TMEM108Q6UXF1 575 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 C22orf34Q6ZV56 151 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CDC20BQ86Y33 519 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 ADGRG5Q8IZF4 528 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 OR13C2Q8NGS9 318 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 OR52N5Q8NH56 324 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CANT1Q8WVQ1 401 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 ASB10Q8WXI3 467 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 TMEM54Q969K7 222 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 PLPPR2Q96GM1 343 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 RSRC1Q96IZ7 334 aaKnown RBP9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CHID1Q9BWS9 393 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 MGAT4BQ9UQ53 548 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 LYVE1Q9Y5Y7 322 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 SLC25A15Q9Y619 301 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CACNA1DQ01668 2161 aa9.51□□□□□ -0.89
HDAC6-211ENST00000443563 CSMD2Q7Z408 3487 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 ARPC4-TTLL3A0A0A6YYG9 625 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 TCRBV3S1A0A5B6 114 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 MGRN1O60291 552 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 CCNB2O95067 398 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 CD3EP07766 207 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 CD14P08571 375 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 FPR3P25089 353 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 PTAFRP25105 342 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 ACVR1BP36896 505 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 ZNF84P51523 738 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 ARF1P84077 181 aaKnown RBP9.5□□□□□ -0.89
HDAC6-211ENST00000443563 TSPAN31Q12999 210 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 TBRG1Q3YBR2 411 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 ARMC4Q5T2S8 1044 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 C1orf146Q5VVC0 180 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 GPR139Q6DWJ6 353 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 RPL13AP3Q6NVV1 102 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 SMARCD3Q6STE5 483 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 ZNF627Q7L945 461 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 LINGO2Q7L985 606 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 ZER1Q7Z7L7 766 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 MEX3DQ86XN8 651 aaKnown RBP9.5□□□□□ -0.89
HDAC6-211ENST00000443563 NOXO1Q8NFA2 376 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
HDAC6-211ENST00000443563 BCL2L2Q92843 193 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-211ENST00000443563 RADILQ96JH8 1075 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 RBP7Q96R05 134 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 GPX7Q96SL4 187 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-211ENST00000443563 ALG12Q9BV10 488 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 MRPL13Q9BYD1 178 aaKnown RBP9.5□□□□□ -0.89
HDAC6-211ENST00000443563 SMURF2Q9HAU4 748 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 GRHPRQ9UBQ7 328 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 ZNF346Q9UL40 294 aaKnown RBP9.5□□□□□ -0.89
HDAC6-211ENST00000443563 SIGLEC7Q9Y286 467 aa9.5□□□□□ -0.89
HDAC6-211ENST00000443563 SAMHD1Q9Y3Z3 626 aaKnown RBP9.5□□□□□ -0.89
HDAC6-211ENST00000443563 XKRYO14609 159 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 SIAH2O43255 324 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 DHHO43323 396 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 AHCYL1O43865 530 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 PTP4A3O75365 173 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 TRMUO75648 421 aaKnown RBP9.49□□□□□ -0.89
HDAC6-211ENST00000443563 QDPRP09417 244 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 GUCA1AP43080 201 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-211ENST00000443563 RPS6KA3P51812 740 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 ARHGDIAP52565 204 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 CD47Q08722 323 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 TOP3AQ13472 1001 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-211ENST00000443563 FHL1Q13642 323 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 HIST3H3Q16695 136 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 MICAQ29983 383 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 C3orf36Q3SXR2 165 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 HIKESHIQ53FT3 197 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 PHYHD1Q5SRE7 291 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 THEM4Q5T1C6 240 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 NCMAPQ5T1S8 102 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 DPY19L2P2Q6ZN68 376 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 ASRGL1Q7L266 308 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 IGFN1Q86VF2 1251 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 DEPDC4Q8N2C3 294 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 ARIH2OSQ8N7S6 290 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 WDR31Q8NA23 367 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 LRRC75AQ8NAA5 344 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 PAPD5Q8NDF8 572 aaKnown RBP9.49□□□□□ -0.89
HDAC6-211ENST00000443563 OR4C15Q8NGM1 316 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 ZNF570Q96NI8 536 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 TSPAN32Q96QS1 320 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 FOXB1Q99853 325 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 KATNB1Q9BVA0 655 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 DENND2DQ9H6A0 471 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-211ENST00000443563 CCM2LQ9NUG4 571 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-211ENST00000443563 RNF115Q9Y4L5 304 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 AKAP9Q99996 3911 aa9.49□□□□□ -0.89
HDAC6-211ENST00000443563 A0A096LPE4 126 aa9.48□□□□□ -0.89
HDAC6-211ENST00000443563 A0A1W2PPZ6 126 aa9.48□□□□□ -0.89
HDAC6-211ENST00000443563 ARRDC5A6NEK1 342 aa9.48□□□□□ -0.89
HDAC6-211ENST00000443563 M0R1B8 84 aa9.48□□□□□ -0.89
HDAC6-211ENST00000443563 IMPA2O14732 288 aa9.48□□□□□ -0.89
HDAC6-211ENST00000443563 FKBP6O75344 327 aa9.48□□□□□ -0.89
HDAC6-211ENST00000443563 FARS2O95363 451 aaKnown RBP9.48□□□□□ -0.89
HDAC6-211ENST00000443563 APEHP13798 732 aaKnown RBP9.48□□□□□ -0.89
HDAC6-211ENST00000443563 GSTM3P21266 225 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms