RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ZNF717Q9BY31 904 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLITRK2Q9H156 845 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 NARFLQ9H6Q4 476 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 MTHFD2LQ9H903 347 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 CD274Q9NZQ7 290 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 CLEC4EQ9ULY5 219 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 MEMO1Q9Y316 297 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 NDUFAF1Q9Y375 327 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 WDR45Q9Y484 360 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 ASB4Q9Y574 426 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZMYM4Q5VZL5 1548 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 SNED1Q8TER0 1413 aa3.47□□□□□ -1.85
CDC42BPA-207ENST00000441725 A0A0A6YYD4 124 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 RNASEK-C17orf49H0YIS7 233 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 BTN3A3O00478 584 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 FBP2O00757 339 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 CASKO14936 926 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 ARPC5O15511 151 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 AQP9O43315 295 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 EMC8O43402 210 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 UBCP0CG48 685 aaKnown RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 SMIM10L1P0DMW3 83 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 DBTP11182 482 aaKnown RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 FGF3P11487 239 aaPredicted RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 PAX1P15863 534 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 SELEP16581 610 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 TCP1P17987 556 aaKnown RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 GPX4P36969 197 aaPredicted RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 GSSP48637 474 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 PGFP49763 221 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 FGF8P55075 233 aaPredicted RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 LSM6P62312 80 aaKnown RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 RELAQ04206 551 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 MTF1Q14872 753 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 EMC2Q15006 297 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 TAF1AQ15573 450 aaPredicted RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 GUK1Q16774 197 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 HACD4Q5VWC8 232 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC8B1Q6J4K2 584 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 TMEM107Q6UX40 140 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 CERS6Q6ZMG9 384 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 C9orf139Q6ZV77 190 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 MRPL21Q7Z2W9 205 aaKnown RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 DHFR2Q86XF0 187 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 LRRC75AQ8NAA5 344 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR4C5Q8NGB2 326 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR5AP2Q8NGF4 316 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR2D3Q8NGH3 330 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR9G4Q8NGQ1 327 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 FBXO25Q8TCJ0 367 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 BLOC1S5Q8TDH9 187 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 PSMG2Q969U7 264 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 C18orf25Q96B23 403 aaPredicted RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 SMIM10Q96HG1 83 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF597Q96LX8 424 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 PRAP1Q96NZ9 151 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 TGS1Q96RS0 853 aaKnown RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 NAPGQ99747 312 aaPredicted RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 HOPXQ9BPY8 73 aaPredicted RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF251Q9BRH9 671 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 TIPINQ9BVW5 301 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC25A51Q9H1U9 297 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 CAB39LQ9H9S4 337 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 UGT1A10Q9HAW8 530 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF71Q9NQZ8 489 aaPredicted RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 KLRF1Q9NZS2 232 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 GNG12Q9UBI6 72 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 KLK11Q9UBX7 282 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 OPN4Q9UHM6 478 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 PURGQ9UJV8 347 aaKnown RBP3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 PPP1R3CQ9UQK1 317 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 MMP24Q9Y5R2 645 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 CPQQ9Y646 472 aa3.46□□□□□ -1.85
CDC42BPA-207ENST00000441725 SUPT6HQ7KZ85 1726 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 DENND4BO75064 1496 aaPredicted RBP3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 EFCAB5A4FU69 1503 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 ABCA9Q8IUA7 1624 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 ZNF724A8MTY0 619 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 A8MUA0 341 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 NEDD8-MDP1E9PL57 170 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 NPIPB9F8W1W9 429 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 CCRL2O00421 344 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 EFNA2O43921 213 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 DUSP11O75319 330 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 ENTPD5O75356 428 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 KHDRBS3O75525 346 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 TSPAN12O95859 305 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 IGSF6O95976 241 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 LINC00614P0C842 121 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 NPR2P20594 1047 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 EDNRAP25101 427 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 ELK4P28324 431 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 CDKN2AP42771 156 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 MAGEA6P43360 314 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 CDK9P50750 372 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 RPL14P50914 215 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 OSTNP61366 133 aa3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 RPS27AP62979 156 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 EWSR1Q01844 656 aaKnown RBP eCLIP3.46□□□□□ -1.86
CDC42BPA-207ENST00000441725 TOMM34Q15785 309 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms