RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 MAT1AQ00266 395 aaKnown RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 SPOCK1Q08629 439 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 RUNX2Q13950 521 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 RNASE10Q5GAN6 216 aaKnown RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 TMEM71Q6P5X7 295 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 KIRREL2Q6UWL6 708 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 NUDT18Q6ZVK8 323 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ABHD13Q7L211 337 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 OR2W3Q7Z3T1 314 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 OOSP2Q86WS3 158 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 FAM219AQ8IW50 185 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 SLC2A12Q8TD20 617 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 USB1Q9BQ65 265 aaKnown RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 CMSS1Q9BQ75 279 aaKnown RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 PITHD1Q9GZP4 211 aaPredicted RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 BIN3Q9NQY0 253 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 TO15178 435 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 CTDSPLO15194 276 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 GLSO94925 669 aaPredicted RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 RENP00797 406 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 THBS1P07996 1170 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 AKR1C3P42330 323 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 RBM34P42696 430 aaKnown RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 EIF1AXP47813 144 aaKnown RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 S100A10P60903 97 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ERV3-1Q14264 604 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ALG10Q5BKT4 473 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 GLT8D1Q68CQ7 371 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ULK3Q6PHR2 472 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 NAXDQ8IW45 347 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 YAF2Q8IY57 180 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 EID2Q8N6I1 236 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ZNF615Q8N8J6 731 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 TMIEQ8NEW7 156 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 NANPQ8TBE9 248 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 PPP1R1CQ8WVI7 109 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 TMED6Q8WW62 240 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ZNRF4Q8WWF5 429 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ATOH1Q92858 354 aaPredicted RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 ZNF681Q96N22 645 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 SARGQ9BW04 601 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 IFT22Q9H7X7 185 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 POLMQ9NP87 494 aaPredicted RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 CENPMQ9NSP4 180 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 FLRT3Q9NZU0 649 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 NPTNQ9Y639 398 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 A0A0D9SG52 128 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 J3QRE1 110 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 SNAPC5O75971 98 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 GAAP10253 952 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 CSF2RAP15509 400 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ITGA3P26006 1051 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 MAOBP27338 520 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 BDKRB2P30411 391 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 AVPR2P30518 371 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 GPR143P51810 404 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 EPHA4P54764 986 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 C2orf27AQ580R0 203 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 MANEAQ5SRI9 462 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ZNF765Q7L2R6 523 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 GABRG1Q8N1C3 465 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 MFSD9Q8NBP5 474 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 OR4S1Q8NGB4 309 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ZNF417Q8TAU3 575 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 TSACCQ96A04 125 aaPredicted RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 FAM3DQ96BQ1 224 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 GIMAP5Q96F15 307 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 SLC25A32Q9H2D1 315 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 STEAP1Q9UHE8 339 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ZNF223Q9UK11 482 aaPredicted RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 DHDHQ9UQ10 334 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 COL4A4P53420 1690 aaPredicted RBP8.26□□□□□ -1.09
COPB1-202ENST00000439561 A0A1B0GV50 99 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 A0A1W2PQU0 124 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 TMEM235A6NFC5 223 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 TMEM200CA6NKL6 621 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 HMSDA8MTL9 139 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 H7C417 338 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 SIGLEC6O43699 453 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 RDH16O75452 317 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 ZNF432O94892 652 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 RD3LP0DJH9 198 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 CALCBP10092 127 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 MGMTP16455 207 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 TYRP1P17643 537 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 GPR85P60893 370 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 RPS15AP62244 130 aaKnown RBP8.26□□□□□ -1.09
COPB1-202ENST00000439561 DPTQ07507 201 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 PDZK1IP1Q13113 114 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 UBXN2BQ14CS0 331 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 GUCA2BQ16661 112 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 IGSF11Q5DX21 431 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 SHEQ5VZ18 495 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 ARMC6Q6NXE6 501 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 ZNF550Q7Z398 422 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 SHISA5Q8N114 240 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 TEX19Q8NA77 164 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 CAMKVQ8NCB2 501 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms