RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CD3DP04234 171 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 VSIG10L2P0DP72 767 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 HTR2AP28223 471 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 NFATC4Q14934 902 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 GFOD2Q3B7J2 385 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 PAN3Q58A45 887 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 PDSS1Q5T2R2 415 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 C1orf53Q5VUE5 145 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 TMEM71Q6P5X7 295 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 GJD3Q8N144 294 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 JAGN1Q8N5M9 183 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 OR51A4Q8NGJ6 313 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 TTC9Q92623 222 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 ADAD1Q96M93 576 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 SMIM3Q9BZL3 60 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 C2orf74A8MZ97 194 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 DPM1O60762 260 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 LY86O95711 162 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 GPR75O95800 540 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 TNFP01375 233 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 OPN1LWP04000 364 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 DCNP07585 359 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 PPP3CBP16298 524 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 HIST1H1CP16403 213 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 CCKBRP32239 447 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 EFNB2P52799 333 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 SCRN3Q0VDG4 424 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 ENPP2Q13822 863 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 EIPR1Q53HC9 387 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 TSSK4Q6SA08 328 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZNF619Q8N2I2 560 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 PXT1Q8NFP0 134 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 OR1S2Q8NGQ3 325 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 TMED6Q8WW62 240 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZNRF4Q8WWF5 429 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 PELI1Q96FA3 418 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 Q96M85 177 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 SERINC2Q96SA4 455 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZCCHC4Q9H5U6 513 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 DENND4CQ5VZ89 1909 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 MPDZO75970 2070 aa9.08□□□□□ -0.96
CDC42SE1-202ENST00000439374 SULT1C2O00338 296 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 ARL6IP5O75915 188 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 GLI4P10075 376 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 AVPR2P30518 371 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 SNRPEP62304 92 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 DEFB133Q30KQ1 61 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 PDZD11Q5EBL8 140 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 TMEM205Q6UW68 189 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 TTLL10Q6ZVT0 673 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 CLRN3Q8NCR9 226 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 BVESQ8NE79 360 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 OR4C16Q8NGL9 310 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 NUBPLQ8TB37 319 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZNF681Q96N22 645 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 OR2A5Q96R48 311 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 MAP3K3Q99759 626 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 TINAGL1Q9GZM7 467 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 BCL2L10Q9HD36 194 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 CGGBP1Q9UFW8 167 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 SLCO1B1Q9Y6L6 691 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 C2orf72A6NCS6 295 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 MFSD2BA6NFX1 497 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 C17orf51A8MQB3 221 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 LINC00587B1AMM8 73 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 KDM4EB2RXH2 506 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 FBXO24O75426 580 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 SRMP19623 302 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 NDUFS1P28331 727 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 TRA2BP62995 288 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 PON3Q15166 354 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZNF615Q8N8J6 731 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 RGP1Q92546 391 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 AHCYL2Q96HN2 611 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 DGAT2Q96PD7 388 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 SARGQ9BW04 601 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZNF350Q9GZX5 532 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 CD207Q9UJ71 328 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 PLXNB3Q9ULL4 1909 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 METTL21EPA6NDL7 271 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 SYT5O00445 386 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 IFNGP01579 166 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 DBIP07108 87 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 KIR2DL1P43626 348 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 P2RX1P51575 399 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 OR2B8PP59922 312 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 SIRPAP78324 504 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZNF85Q03923 595 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 ZIC1Q15915 447 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 CCDC157Q569K6 752 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 SHEQ5VZ18 495 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 H3F3CQ6NXT2 135 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 ISOC2Q96AB3 205 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 VRK1Q99986 396 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 DHCR7Q9UBM7 475 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 KCNE5Q9UJ90 142 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 CES1P1Q9UKY3 287 aa9.07□□□□□ -0.96
CDC42SE1-202ENST00000439374 PRRC2CQ9Y520 2896 aaKnown RBP9.06□□□□□ -0.96
CDC42SE1-202ENST00000439374 GVINP1Q7Z2Y8 2422 aa9.06□□□□□ -0.96
CDC42SE1-202ENST00000439374 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms