RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TCN1P20061 433 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 SLC6A2P23975 617 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 CHI3L1P36222 383 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 OR2B6P58173 313 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 SLC35A1P78382 337 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 SRSF4Q08170 494 aaKnown RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 SLC17A1Q14916 467 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 SLC9A3R2Q15599 337 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 CDC73Q6P1J9 531 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 AAED1Q7RTV5 226 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 SERPINA11Q86U17 422 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 MSRB3Q8IXL7 192 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 ZNF614Q8N883 585 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 JADE3Q92613 823 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 PMM1Q92871 262 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 CDS1Q92903 461 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 POP5Q969H6 163 aaKnown RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 AURKBQ96GD4 344 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 RBM4BQ9BQ04 359 aaKnown RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 BTBD10Q9BSF8 475 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 ACTRT3Q9BYD9 372 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 MMADHCQ9H3L0 296 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 PIF1Q9H611 641 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 SPAG4Q9NPE6 437 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 GPATCH2Q9NW75 528 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 TMEM181Q9P2C4 612 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 ABCD2Q9UBJ2 740 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 CHRNA9Q9UGM1 479 aa9.53□□□□□ -0.88
CSTF3-203ENST00000438862 PRPF19Q9UMS4 504 aaKnown RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 FAF1Q9UNN5 650 aaPredicted RBP9.53□□□□□ -0.88
CSTF3-203ENST00000438862 NUP214P35658 2090 aaPredicted RBP9.52□□□□□ -0.88
CSTF3-203ENST00000438862 PPIAL4EA0A075B759 164 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 PPIAL4CA0A0B4J2A2 164 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 IGHV2OR16-5A0A0B4J2B6 119 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF587BE7ETH6 402 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 PPIAL4DF5H284 164 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 RP2O75695 350 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 AK1P00568 194 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 HMGN2P05204 90 aaKnown RBP9.52□□□□□ -0.89
CSTF3-203ENST00000438862 PPIAL4FP0DN26 164 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 EFNA1P20827 205 aaPredicted RBP9.52□□□□□ -0.89
CSTF3-203ENST00000438862 ARR3P36575 388 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 MVDP53602 400 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 PSME3P61289 254 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 MXRA7P84157 204 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 RBBP4Q09028 425 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 SNTB2Q13425 540 aaKnown RBP9.52□□□□□ -0.89
CSTF3-203ENST00000438862 RGNQ15493 299 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 ZSCAN26Q16670 478 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 OTUD3Q5T2D3 398 aaPredicted RBP9.52□□□□□ -0.89
CSTF3-203ENST00000438862 C16orf87Q6PH81 154 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 RHOUQ7L0Q8 258 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 REC114Q7Z4M0 266 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 SLC15A3Q8IY34 581 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 KIR3DL3Q8N743 410 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 RBM15BQ8NDT2 890 aaKnown RBP9.52□□□□□ -0.89
CSTF3-203ENST00000438862 OIT3Q8WWZ8 545 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 SLC7A6OSQ96CW6 309 aaPredicted RBP9.52□□□□□ -0.89
CSTF3-203ENST00000438862 MRPL37Q9BZE1 423 aaKnown RBP9.52□□□□□ -0.89
CSTF3-203ENST00000438862 KAT8Q9H7Z6 458 aaKnown RBP9.52□□□□□ -0.89
CSTF3-203ENST00000438862 SEC61A2Q9H9S3 476 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 SLC6A13Q9NSD5 602 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 ZNF69Q9UC07 566 aa9.52□□□□□ -0.89
CSTF3-203ENST00000438862 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.52□□□□□ -0.89
CSTF3-203ENST00000438862 GYG2O15488 501 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 LGI1O95970 557 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 IGHV2-5P01817 119 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 MATN1P21941 496 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 NR4A1P22736 598 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 OMGP23515 440 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 PCGF2P35227 344 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 SOAT1P35610 550 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 SH3BGRP55822 239 aaPredicted RBP9.51□□□□□ -0.89
CSTF3-203ENST00000438862 TUBA1BP68363 451 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 TUBA4AP68366 448 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 MVKQ03426 396 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 SKP2Q13309 424 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 GNA13Q14344 377 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 ARMCX4Q5H9R4 360 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 SAMD4BQ5PRF9 694 aaKnown RBP9.51□□□□□ -0.89
CSTF3-203ENST00000438862 DCST2Q5T1A1 773 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 PRAMEF8Q5VWM4 474 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 PRAMEF7Q5VXH5 474 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 ERICH5Q6P6B1 374 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 Q6ZPA2 131 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 TUBA1AQ71U36 451 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 SPATC1Q76KD6 591 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 NET1Q7Z628 596 aaPredicted RBP9.51□□□□□ -0.89
CSTF3-203ENST00000438862 SLC30A8Q8IWU4 369 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 ZIC4Q8N9L1 334 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 OR4F5Q8NH21 305 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 ADAMTS15Q8TE58 950 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 OTUB1Q96FW1 271 aaPredicted RBP9.51□□□□□ -0.89
CSTF3-203ENST00000438862 HSH2DQ96JZ2 352 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 SLC35G5Q96KT7 338 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 ECSITQ9BQ95 431 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 CPPED1Q9BRF8 314 aaPredicted RBP9.51□□□□□ -0.89
CSTF3-203ENST00000438862 SF3B5Q9BWJ5 86 aaKnown RBP9.51□□□□□ -0.89
CSTF3-203ENST00000438862 TMEM38AQ9H6F2 299 aa9.51□□□□□ -0.89
CSTF3-203ENST00000438862 NOX3Q9HBY0 568 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms