RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 A0A1B0GTH9 108 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 A0A1W2PNV4 684 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 C22orf46C9J442 243 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 RNF13O43567 381 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 TLX2O43763 284 aaPredicted RBP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 IDH3BO43837 385 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 EIF1BO60739 113 aaKnown RBP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 ENTPD6O75354 484 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 PLGP00747 810 aaPredicted RBP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 IGHMP01871 453 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 HIST1H1CP16403 213 aaKnown RBP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 FPR2P25090 351 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 CD40P25942 277 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 CDKN2AP42771 156 aaKnown RBP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 KIR2DL2P43627 348 aaPredicted RBP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 DBPQ10586 325 aaPredicted RBP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 ITGADQ13349 1161 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 ACKR1Q16570 336 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 SMN1Q16637 294 aaKnown RBP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 SLC25A30Q5SVS4 291 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 C6orf141Q5SZD1 244 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 PDSS1Q5T2R2 415 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 ARMC4Q5T2S8 1044 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 AADACL4Q5VUY2 407 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 GPR139Q6DWJ6 353 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 TMEM225Q6GV28 225 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 KRT80Q6KB66 452 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 PLXDC2Q6UX71 529 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 CASP12Q6UXS9 341 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 PTCHD4Q6ZW05 846 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 ZIC4Q8N9L1 334 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 SLC37A3Q8NCC5 494 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 OR52E2Q8NGJ4 325 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 OR8J1Q8NGP2 316 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 OR4K13Q8NH42 304 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 ZNF519Q8TB69 540 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 TMEM163Q8TC26 289 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 ROBO4Q8WZ75 1007 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 PTP4A1Q93096 173 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 RASD2Q96D21 266 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 TXNDC15Q96J42 360 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 GPR137Q96N19 417 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 OXGR1Q96P68 337 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 SLC38A2Q96QD8 506 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 TUBA1CQ9BQE3 449 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 NAA11Q9BSU3 229 aaPredicted RBP6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 HCAR1Q9BXC0 346 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 TEX12Q9BXU0 123 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 TXNIPQ9H3M7 391 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 CMC2Q9NRP2 79 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 IMPAD1Q9NX62 359 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 GRHPRQ9UBQ7 328 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 RASD1Q9Y272 281 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 NOX1Q9Y5S8 564 aa6.26□□□□□ -1.41
LSM3P3-201ENST00000436601 A0A1W2PRG6 482 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 OR6C68A6NDL8 312 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 NPIPB13A6NJU9 1138 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 FAM183AA6NL82 134 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 RIIAD1A6NNX1 92 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ZNF716A6NP11 495 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 KDM4EB2RXH2 506 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 NPIPB4C9JG80 1138 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 NPIPA2E9PIF3 369 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 NPIPA3F8WFD2 350 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 DVL2O14641 736 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 TRAF3IP2O43734 574 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 MPZL2O60487 215 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 CYTIPO60759 359 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 SERPINI2O75830 405 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 AQP8O94778 261 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 SDHAP31040 664 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 FMO3P31513 532 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 TDGF1P3P51864 188 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 CHN2P52757 468 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 RPL27P61353 136 aaKnown RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 POU3F1Q03052 451 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 RUNX1T1Q06455 604 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 TOP3AQ13472 1001 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 KRR1Q13601 381 aaKnown RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 CRMP1Q14194 572 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 MELKQ14680 651 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 SLC17A1Q14916 467 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 KRTCAP3Q53RY4 240 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 PRR30Q53SZ7 412 aaPredicted RBP6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 MESTQ5EB52 335 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 EMC4Q5J8M3 183 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ABLIM2Q6H8Q1 611 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 PLBD1Q6P4A8 553 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ARHGAP11AQ6P4F7 1023 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 FAM180AQ6UWF9 173 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 CREB3L2Q70SY1 520 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 SLC35D2Q76EJ3 337 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 GPAT4Q86UL3 456 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 CPOQ8IVL8 374 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 UEVLDQ8IX04 471 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ZNF786Q8N393 782 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 ARIH2OSQ8N7S6 290 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 TEX19Q8NA77 164 aa6.25□□□□□ -1.41
LSM3P3-201ENST00000436601 CYB561A3Q8NBI2 242 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms