RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 ATG2BQ96BY7 2078 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 PCP4L1A6NKN8 68 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 OR4C45A6NMZ5 311 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 I3L521 148 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 SCDO00767 359 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 LINC01565O15544 149 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 IL33O95760 270 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 WDPCPO95876 746 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 HIST1H2ABP04908 130 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 CTSBP07858 339 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 ADRA2CP18825 462 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 MAGEB1P43366 347 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 BTG2P78543 158 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 LTBQ06643 244 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 SKP2Q13309 424 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 CBFBQ13951 182 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 NNATQ16517 81 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 AANATQ16613 207 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 HIST3H2AQ7L7L0 130 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 TMPRSS12Q86WS5 348 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 AVL9Q8NBF6 648 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 DNAAF1Q8NEP3 725 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 OR2G2Q8NGZ5 317 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 CEP76Q8TAP6 659 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 GCDHQ92947 438 aaPredicted RBP10.27□□□□□ -0.77
USP4-205ENST00000431357 HIST1H2ACQ93077 130 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 SEC22CQ9BRL7 303 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 SRA1Q9HD15 236 aaKnown RBP10.27□□□□□ -0.77
USP4-205ENST00000431357 PIPOXQ9P0Z9 390 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 ZNF69Q9UC07 566 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 IKZF2Q9UKS7 526 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 KLHDC2Q9Y2U9 406 aa10.27□□□□□ -0.77
USP4-205ENST00000431357 TICRRQ7Z2Z1 1910 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 PLSCR5A0PG75 271 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 UBE2QL1A1L167 161 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 OR2M5A3KFT3 312 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 C10orf142B7Z368 130 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 H7C417 338 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 L7N2F9 121 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 ZNF264O43296 627 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 CDC123O75794 336 aaPredicted RBP10.26□□□□□ -0.77
USP4-205ENST00000431357 TOXO94900 526 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 CSF1P09603 554 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 SLC6A8P48029 635 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 SOX2P48431 317 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 CCR5P51681 352 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 SSTP61278 116 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 GRM7Q14831 915 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 MED25Q71SY5 747 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 ZNF761Q86XN6 746 aaPredicted RBP10.26□□□□□ -0.77
USP4-205ENST00000431357 ZNF676Q8N7Q3 588 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 PHOSPHO1Q8TCT1 267 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 ZDHHC1Q8WTX9 485 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 PIGKQ92643 395 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 MOGAT1Q96PD6 335 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 TSSK2Q96PF2 358 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 CHIAQ9BZP6 476 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 FANCFQ9NPI8 374 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 MTFP1Q9UDX5 166 aa10.26□□□□□ -0.77
USP4-205ENST00000431357 MRTO4Q9UKD2 239 aaKnown RBP10.26□□□□□ -0.77
USP4-205ENST00000431357 YBX2Q9Y2T7 364 aaKnown RBP10.26□□□□□ -0.77
USP4-205ENST00000431357 KIAA0100Q14667 2235 aaKnown RBP10.26□□□□□ -0.77
USP4-205ENST00000431357 SPTY2D1-AS1A0A0U1RR47 76 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 A0A1W2PPL8 197 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 OR6C65A6NJZ3 312 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 MEN1O00255 615 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 CLPSP04118 112 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 ALDOBP05062 364 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 CELA2BP08218 269 aaPredicted RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 ALOX5APP20292 161 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 ITPKBP27987 946 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 DCTDP32321 178 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 PPICP45877 212 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 BLKP51451 505 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 DLX5P56178 289 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 MAT1AQ00266 395 aaKnown RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 SSBP1Q04837 148 aaKnown RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 RPL18Q07020 188 aaKnown RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 ERV3-1Q14264 604 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 RBMS2Q15434 407 aaKnown RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 EEF1A1P5Q5VTE0 462 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 FDX2Q6P4F2 183 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 ANKRD16Q6P6B7 361 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 FAM198BQ6UWH4 519 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 TMEM92Q6UXU6 159 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 ADGRG3Q86Y34 549 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 SFTPA2Q8IWL1 248 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 ARL6IP6Q8N6S5 226 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 C7orf57Q8NEG2 295 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 ZNF285Q96NJ3 590 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 DCBLD2Q96PD2 775 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 INTS14Q96SY0 518 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 LPAR4Q99677 370 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 GPR174Q9BXC1 333 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 FKRPQ9H9S5 495 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 SLC17A5Q9NRA2 495 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 WSB2Q9NYS7 404 aaPredicted RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 CDV3Q9UKY7 258 aaKnown RBP10.25□□□□□ -0.77
USP4-205ENST00000431357 PCDHGA5Q9Y5G8 931 aa10.25□□□□□ -0.77
USP4-205ENST00000431357 ARHGEF17Q96PE2 2063 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms