RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	ZNF583	Q96ND8	569 aa		15.33	■□□□□ 0.04
MRPL28-203	ENST00000429738	ECSIT	Q9BQ95	431 aa		15.33	■□□□□ 0.04
MRPL28-203	ENST00000429738	FBXO9	Q9UK97	447 aa	Predicted RBP	15.33	■□□□□ 0.04
MRPL28-203	ENST00000429738	POFUT2	Q9Y2G5	429 aa		15.33	■□□□□ 0.04
MRPL28-203	ENST00000429738	TMEM129	A0AVI4	362 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	NDUFS8	O00217	210 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	MRAS	O14807	208 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	SERPINI2	O75830	405 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	B4GALT1	P15291	398 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	ZNF16	P17020	682 aa	Predicted RBP	15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	NPR2	P20594	1047 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	CSNK1A1	P48729	337 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	GZMK	P49863	264 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	PDLIM4	P50479	330 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	GSG1	Q2KHT4	349 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	MMEL1	Q495T6	779 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	ERICH5	Q6P6B1	374 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	SLC35D2	Q76EJ3	337 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	OR6N1	Q8NGY5	312 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	DOK1	Q99704	481 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	POLR2J2	Q9GZM3	115 aa	Known RBP	15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	POLR2J3	Q9H1A7	115 aa	Known RBP	15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	DENND2D	Q9H6A0	471 aa	Predicted RBP	15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	MYOZ1	Q9NP98	299 aa	Predicted RBP	15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	ZNF446	Q9NWS9	450 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	GLTP	Q9NZD2	209 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	BAG5	Q9UL15	447 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	SH3GLB1	Q9Y371	365 aa		15.32	■□□□□ 0.04
MRPL28-203	ENST00000429738	KPNA4	O00629	521 aa	Predicted RBP	15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	OR6A2	O95222	327 aa		15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	IGF2	P01344	180 aa		15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	IGFBP1	P08833	259 aa	Predicted RBP	15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	CD79A	P11912	226 aa		15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	ZNF35	P13682	527 aa		15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	SRSF2	Q01130	221 aa	Known RBP	15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	MAPRE2	Q15555	327 aa		15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	CARM1	Q86X55	608 aa		15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	ANKS4B	Q8N8V4	417 aa		15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	SLC25A44	Q96H78	314 aa	Predicted RBP	15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	VRK1	Q99986	396 aa	Predicted RBP	15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	CCDC134	Q9H6E4	229 aa		15.31	■□□□□ 0.04
MRPL28-203	ENST00000429738	FAM220BP	B1ANY3	271 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	hCG_2039718	K7EN88	272 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	RNF13	O43567	381 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	MT-ND1	P03886	318 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	TSPAN19	P0C672	248 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	PGA4	P0DJD7	388 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	PGA3	P0DJD8	388 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	TNFRSF1B	P20333	461 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	NR4A1	P22736	598 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	IGFBP5	P24593	272 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	RBM34	P42696	430 aa	Known RBP	15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	NR4A2	P43354	598 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	UGT2B15	P54855	530 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	SF3A3	Q12874	501 aa	Known RBP eCLIP	15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	SNTB2	Q13425	540 aa	Known RBP	15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	DAG1	Q14118	895 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	MELK	Q14680	651 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	LRFN4	Q6PJG9	635 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	PIWIL3	Q7Z3Z3	882 aa	Known RBP	15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	NKAIN4	Q8IVV8	208 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	PCYOX1L	Q8NBM8	494 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	C10orf82	Q8WW14	230 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	ZNF566	Q969W8	418 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	MS4A3	Q96HJ5	214 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	KCNS2	Q9ULS6	477 aa		15.3	■□□□□ 0.04
MRPL28-203	ENST00000429738	LOC100653049	A0A140TA62	436 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	LOC390937	A0A1W2PQ73	354 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	VSTM5	A8MXK1	200 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	KRT34	O76011	436 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	UBL3	O95164	117 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	OR5F1	O95221	314 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	HIST1H2AB	P04908	130 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	RAB1A	P62820	205 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	PIGF	Q07326	219 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	HIST3H3	Q16695	136 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	MSMP	Q1L6U9	139 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	FAM120AOS	Q5T036	256 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	FAM166A	Q6J272	317 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	KRT80	Q6KB66	452 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	HIST3H2A	Q7L7L0	130 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	SPATA21	Q7Z572	469 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	SVOPL	Q8N434	492 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	PFN4	Q8NHR9	129 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	LIPH	Q8WWY8	451 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	HIST1H2AC	Q93077	130 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	SEPHS2	Q99611	448 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	PIMREG	Q9BSJ6	248 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	RAB1B	Q9H0U4	201 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	TMEM38B	Q9NVV0	291 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	GID8	Q9NWU2	228 aa		15.29	■□□□□ 0.04
MRPL28-203	ENST00000429738	LOC100289279	A0A1B0GTE1	492 aa		15.28	■□□□□ 0.04
MRPL28-203	ENST00000429738	SLC22A2	O15244	555 aa		15.28	■□□□□ 0.04
MRPL28-203	ENST00000429738	DHH	O43323	396 aa		15.28	■□□□□ 0.04
MRPL28-203	ENST00000429738	IFNA14	P01570	189 aa		15.28	■□□□□ 0.04
MRPL28-203	ENST00000429738	VIM	P08670	466 aa	Known RBP	15.28	■□□□□ 0.04
MRPL28-203	ENST00000429738	THRB	P10828	461 aa		15.28	■□□□□ 0.04
MRPL28-203	ENST00000429738	UMPS	P11172	480 aa		15.28	■□□□□ 0.04
MRPL28-203	ENST00000429738	KDELR2	P33947	212 aa		15.28	■□□□□ 0.04
MRPL28-203	ENST00000429738	OR1E2	P47887	323 aa		15.28	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms