RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ST3GAL2Q16842 350 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC25A53Q5H9E4 307 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 PHYHD1Q5SRE7 291 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 TMEM225Q6GV28 225 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC27A4Q6P1M0 643 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF585AQ6P3V2 769 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 TMPPEQ6ZT21 453 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC22A16Q86VW1 577 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 PM20D2Q8IYS1 436 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 FAM109AQ8N4B1 249 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF540Q8NDQ6 660 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 S100ZQ8WXG8 99 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 BBC3Q96PG8 261 aaPredicted RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 POLDIP3Q9BY77 421 aaKnown RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 MROQ9BYG7 248 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 SYT4Q9H2B2 425 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 ANKRD19PQ9H560 264 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZDHHC11Q9H8X9 412 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 RPRD1BQ9NQG5 326 aaKnown RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 TINAGQ9UJW2 476 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 PMF1-BGLAPU3KQ54 211 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 FAM47E-STBD1D6RA91 191 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 BOLA2-SMG1P6H3BVE0 249 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 FAM20BO75063 409 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 TGFBR2P37173 567 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 CD79BP40259 229 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 SELENOPP49908 381 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 SUMO3P55854 103 aaPredicted RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 RAC1P63000 192 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 CSNK2BP67870 215 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 OXA1LQ15070 435 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 PGGHGQ32M88 737 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 EMC4Q5J8M3 183 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 UBE2UQ5VVX9 321 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 IGFL3Q6UXB1 125 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 BTLAQ7Z6A9 289 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 P2RY8Q86VZ1 359 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 RNF113BQ8IZP6 322 aaKnown RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 MFSD4AQ8N468 514 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 TEX19Q8NA77 164 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 LRRC75AQ8NAA5 344 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 FAM98AQ8NCA5 519 aaKnown RBP8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR5J2Q8NH18 312 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 NEIL3Q8TAT5 605 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 NDNFQ8TB73 568 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 NSMAFQ92636 917 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 ITFG2Q969R8 447 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 ADGRG7Q96K78 797 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 RNF32Q9H0A6 362 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 C12orf49Q9H741 205 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 SERINC1Q9NRX5 453 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 ASB6Q9NWX5 421 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 IMPAD1Q9NX62 359 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 B4GALT7Q9UBV7 327 aa8.49□□□□□ -1.05
HMGCLL1-206ENST00000428842 TVP23AA6NH52 213 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 TTLL8A6PVC2 850 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 SURF4O15260 269 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 HIST1H2ABP04908 130 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 GTF2E2P29084 291 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 CDAP32320 146 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 BIDP55957 195 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 PSPHP78330 225 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 PUDPQ08623 228 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 DGUOKQ16854 277 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 LEG1Q6P5S2 330 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 PLEKHG7Q6ZR37 379 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 AHSA2Q719I0 299 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 HIST3H2AQ7L7L0 130 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 FAM122BQ7Z309 247 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 SIAH3Q8IW03 269 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 DND1Q8IYX4 353 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 ZNF511Q8NB15 262 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR2T33Q8NG76 320 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR6Q1Q8NGQ2 317 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 HIST1H2ACQ93077 130 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC35B4Q969S0 331 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 MIB2Q96AX9 1013 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 NEURL2Q9BR09 285 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 OR2B2Q9GZK3 357 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 PRORYQ9H606 182 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 PLCXD1Q9NUJ7 323 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 HIF3AQ9Y2N7 669 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 ABCA4P78363 2273 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 UBR5O95071 2799 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 SLC35F4A4IF30 521 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 M0R3G1 203 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 NDUFB2O95178 105 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 FADS2O95864 444 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 GABRB1P18505 474 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 EIF1P41567 113 aaKnown RBP8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 SERPINB10P48595 397 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 VBP1P61758 197 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 FOXF2Q12947 444 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 VASNQ6EMK4 673 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 RPTNQ6XPR3 784 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 H1FNTQ75WM6 255 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 MAMDC2Q7Z304 686 aaPredicted RBP8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 TUSC5Q8IXB3 177 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 GPALPP1Q8IXQ4 340 aa8.48□□□□□ -1.05
HMGCLL1-206ENST00000428842 MINDY2Q8NBR6 621 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms