RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 S1PR1P21453 382 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR1G1P47890 313 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TAS2R41P59536 307 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 FRRS1Q6ZNA5 592 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 Q6ZNB5 142 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 RFLNAQ6ZTI6 216 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 ZNF595Q8IYB9 648 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 COMMD1Q8N668 190 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 ZDHHC22Q8N966 263 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR52B4Q8NGK2 314 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 ZNF671Q8TAW3 534 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TMEM159Q96B96 161 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TMEM121BQ9BXQ6 578 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 APMAPQ9HDC9 416 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 C14orf105Q9NVL8 296 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 SLC17A2O00624 439 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR2T1O43869 369 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TBPP20226 339 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 PRSS3P35030 304 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TSFMP43897 325 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 DIO1P49895 249 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 RHOAP61586 193 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 RPE65Q16518 533 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 SLC16A13Q7RTY0 426 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 UBE3DQ7Z6J8 389 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 GLB1L2Q8IW92 636 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 GTPBP8Q8N3Z3 284 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR14A2Q96R54 314 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 GPX7Q96SL4 187 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR51I1Q9H343 314 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 KCNG2Q9UJ96 466 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 LYPD3O95274 346 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 CSF1P09603 554 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 NANOS3P60323 173 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 FAM110CQ1W6H9 321 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 KHDRBS2Q5VWX1 349 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 ZNF613Q6PF04 617 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 GLB1LQ6UWU2 654 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 RSPO2Q6UXX9 243 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 RHOUQ7L0Q8 258 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 ZNF280BQ86YH2 543 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 NRMQ8IXM6 262 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 INO80EQ8NBZ0 244 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR4K17Q8NGC6 315 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 SMPDL3BQ92485 455 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 RIOK2Q9BVS4 552 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 ARV1Q9H2C2 271 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 FAM96BQ9Y3D0 163 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 A0A0A6YYC8 382 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 RPL36A-HNRNPH2H7BZ11 118 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 I3L1I5 382 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 UPK3AO75631 287 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 RPN2P04844 631 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TPT1P13693 172 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 ANKRD39Q53RE8 183 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 NKAIN2Q5VXU1 208 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 Q6ZVL8 140 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 C19orf47Q8N9M1 422 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 ADAT1Q9BUB4 502 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 GPR55Q9Y2T6 319 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 CCDC187A0A096LP49 1063 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TRBV5-7A0A0A0MS05 114 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 GJB5O95377 273 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 CDX1P47902 265 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 SULT1A2P50226 295 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 NPY4RP50391 375 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 ZNF239Q16600 458 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 PLEKHN1Q494U1 663 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 TMEM35AQ53FP2 167 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 SP5Q6BEB4 398 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 ZCCHC12Q6PEW1 402 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 GDF7Q7Z4P5 450 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR5J2Q8NH18 312 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 WFDC5Q8TCV5 224 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TCTN2Q96GX1 697 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 MTHFD2LQ9H903 347 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 PRSS16Q9NQE7 514 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 PRMT8Q9NR22 394 aaPredicted RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 KLHL28Q9NXS3 571 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 FBLN5Q9UBX5 448 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 FBXL4Q9UKA2 621 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 A0A087WUJ7 227 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 DUXAA6NLW8 204 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 TSPAN6O43657 245 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 CTAG2O75638 210 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR4Q2P0C623 313 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 GPR4P46093 362 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 PGDP52209 483 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 F2RL1P55085 397 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 CCL23P55773 120 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 SNRPD1P62314 119 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 ELAVL2Q12926 359 aaKnown RBP4.68□□□□□ -1.66
RIF1-203ENST00000428287 PON3Q15166 354 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR2B11Q5JQS5 317 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 STPG1Q5TH74 334 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 ABLIM2Q6H8Q1 611 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 SSX6Q7RTT6 188 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 NUP54Q7Z3B4 507 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR51S1Q8NGJ8 323 aa4.68□□□□□ -1.66
RIF1-203ENST00000428287 OR13D1Q8NGV5 346 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms