RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 HGFACQ04756 655 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 KRTAP1-1Q07627 177 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 LOXL1Q08397 574 aaPredicted RBP13.15□□□□□ -0.3
PHF1-204ENST00000427826 LRRC23Q53EV4 343 aaPredicted RBP13.15□□□□□ -0.3
PHF1-204ENST00000427826 VHLLQ6RSH7 139 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 TMEM239Q8WW34 195 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 HTRA1Q92743 480 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 RCN3Q96D15 328 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.3
PHF1-204ENST00000427826 PLK3Q9H4B4 646 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 SEC61A2Q9H9S3 476 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 MYOZ1Q9NP98 299 aaPredicted RBP13.15□□□□□ -0.3
PHF1-204ENST00000427826 MEPEQ9NQ76 525 aaPredicted RBP13.15□□□□□ -0.3
PHF1-204ENST00000427826 ARMCX1Q9P291 453 aa13.15□□□□□ -0.3
PHF1-204ENST00000427826 ZNF503-AS2A6NEH8 195 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 CENPBD1B2RD01 187 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 NDUFS8O00217 210 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 NDUFAB1O14561 156 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 FARS2O95363 451 aaKnown RBP13.14□□□□□ -0.31
PHF1-204ENST00000427826 RAB36O95755 333 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 IGHG1P01857 330 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 TNFRSF1BP20333 461 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 THBS4P35443 961 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 OR1E2P47887 323 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 PPOXP50336 477 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 PDLIM4P50479 330 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 RAB1AP62820 205 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 PIGFQ07326 219 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 PIN1Q13526 163 aaPredicted RBP13.14□□□□□ -0.31
PHF1-204ENST00000427826 DAG1Q14118 895 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 NKAIN4Q8IVV8 208 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 C10orf105Q8TEF2 133 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 SGTBQ96EQ0 304 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 TPD52L3Q96J77 140 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 TNFRSF13CQ96RJ3 184 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 VRK1Q99986 396 aaPredicted RBP13.14□□□□□ -0.31
PHF1-204ENST00000427826 RAB1BQ9H0U4 201 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 EFCAB1Q9HAE3 211 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 STX18Q9P2W9 335 aaKnown RBP13.14□□□□□ -0.31
PHF1-204ENST00000427826 MED31Q9Y3C7 131 aa13.14□□□□□ -0.31
PHF1-204ENST00000427826 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 MCIDASD6RGH6 385 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 hCG_2039718K7EN88 272 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 MGRN1O60291 552 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 OR7A10O76100 309 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 PGA4P0DJD7 388 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 PGA3P0DJD8 388 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 OR8G3PP0DMU2 310 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 COX4I1P13073 169 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 ZNF14P17017 642 aaPredicted RBP13.13□□□□□ -0.31
PHF1-204ENST00000427826 NR4A1P22736 598 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 LSP1P33241 339 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 PTDSS1P48651 473 aaKnown RBP13.13□□□□□ -0.31
PHF1-204ENST00000427826 DAP3P51398 398 aaKnown RBP13.13□□□□□ -0.31
PHF1-204ENST00000427826 CLRN1P58418 232 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 RPL18Q07020 188 aaKnown RBP13.13□□□□□ -0.31
PHF1-204ENST00000427826 ST3GAL3Q11203 375 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 LRFN4Q6PJG9 635 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 SPATA21Q7Z572 469 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 DPPA2Q7Z7J5 298 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 MYPOPQ86VE0 399 aaPredicted RBP13.13□□□□□ -0.31
PHF1-204ENST00000427826 WDFY1Q8IWB7 410 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 SLC22A24Q8N4F4 322 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 POU5F2Q8N7G0 328 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 PFN4Q8NHR9 129 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 TMEM255BQ8WV15 326 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 FAM107BQ9H098 131 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 NOX3Q9HBY0 568 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 CMTM6Q9NX76 183 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 CMAHPQ9Y471 501 aa13.13□□□□□ -0.31
PHF1-204ENST00000427826 GSTA4O15217 222 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 DHHO43323 396 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 SHOX2O60902 331 aaPredicted RBP13.12□□□□□ -0.31
PHF1-204ENST00000427826 CRLF1O75462 422 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 QDPRP09417 244 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 USF1P22415 310 aaPredicted RBP13.12□□□□□ -0.31
PHF1-204ENST00000427826 GIPRP48546 466 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 EVX1P49640 407 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 ZNF84P51523 738 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 UGT2B15P54855 530 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 GALK2Q01415 458 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 LIPEQ05469 1076 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 SNTB2Q13425 540 aaKnown RBP13.12□□□□□ -0.31
PHF1-204ENST00000427826 MELKQ14680 651 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 HIST3H3Q16695 136 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 NRN1LQ496H8 165 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 SLC15A3Q8IY34 581 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 ZNF540Q8NDQ6 660 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 PRRC1Q96M27 445 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 ZNF75AQ96N20 296 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 SORCS2Q96PQ0 1159 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 ELAC2Q9BQ52 826 aaKnown RBP13.12□□□□□ -0.31
PHF1-204ENST00000427826 PIMREGQ9BSJ6 248 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 YAE1D1Q9NRH1 226 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 INIPQ9NRY2 104 aa13.12□□□□□ -0.31
PHF1-204ENST00000427826 JMJD1CQ15652 2540 aa13.11□□□□□ -0.31
PHF1-204ENST00000427826 A0A096LNT2 108 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms