RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CMTM1Q8IZ96 169 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 EID3Q8N140 333 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 STPG2Q8N412 459 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 RIBC1Q8N443 379 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-205ENST00000424674 IQCF1Q8N6M8 205 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 ACBD4Q8NC06 268 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 VN1R2Q8NFZ6 395 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 OR51A7Q8NH64 312 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 OR5K2Q8NHB8 316 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 ITFG1Q8TB96 612 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 MRPS31Q92665 395 aaKnown RBP3.18□□□□□ -1.9
SF3B1-205ENST00000424674 PTH2Q96A98 100 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 FAF2Q96CS3 445 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 SGTBQ96EQ0 304 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 MBOAT7Q96N66 472 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 PRAP1Q96NZ9 151 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 STACQ99469 402 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 KLHDC3Q9BQ90 382 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 BEX2Q9BXY8 128 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 A4GALTQ9NPC4 353 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 DIABLOQ9NR28 239 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 SLC2A9Q9NRM0 540 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 PAK1IP1Q9NWT1 392 aaPredicted RBP3.18□□□□□ -1.9
SF3B1-205ENST00000424674 HRASLS2Q9NWW9 162 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 FBXL3Q9UKT7 428 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 PAIP2BQ9ULR5 123 aaKnown RBP3.18□□□□□ -1.9
SF3B1-205ENST00000424674 ERVW-1Q9UQF0 538 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 MMACHCQ9Y4U1 282 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 CSNK1G3Q9Y6M4 447 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 USH1CQ9Y6N9 552 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 STK36Q9NRP7 1315 aa3.18□□□□□ -1.9
SF3B1-205ENST00000424674 NACADO15069 1562 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 A0A0A6YYD4 124 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 A0A0A6YYD5 115 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 IGHV2-70DA0A0C4DH43 119 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GLYATL1P3A0A0U1RQE8 302 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 A0A1B0GVI7 797 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 A0A1W2PR80 420 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 TSPAN11A1L157 253 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 LILRA5A6NI73 299 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 H3BNX3 289 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 MAGEB4O15481 346 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ZNHIT1O43257 154 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ATP8B1O43520 1251 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 CXCL13O43927 109 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 HPGDSO60760 199 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ALOX12BO75342 701 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 MPDU1O75352 247 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GAGE7O76087 117 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 SRP72O76094 671 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 HLA-AP01891 365 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 SERPINB2P05120 415 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 C2P06681 752 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 TACSTD2P09758 323 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GAGE12FP0CL80 117 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GAGE12GP0CL81 117 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GAGE12IP0CL82 117 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 THRAP10827 490 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GFAPP14136 432 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ITGA2P17301 1181 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ATP6V1B2P21281 511 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 IDSP22304 550 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 S100A1P23297 94 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 CMA1P23946 247 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 IL12AP29459 219 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 TGFBR2P37173 567 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 LEPP41159 167 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 NBL1P41271 181 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 MAGEA12P43365 314 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 CDK9P50750 372 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 IDH3GP51553 393 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 FUT6P51993 359 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 BACE1P56817 501 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 SPCS3P61009 180 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 RPL27P61353 136 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GAGE1Q13065 139 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 GAGE4Q13068 117 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 SRSF9Q13242 221 aaKnown RBP eCLIP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 MAD2L1BPQ15013 274 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 TAL2Q16559 108 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 DUSP7Q16829 419 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 PRTGQ2VWP7 1150 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ZNF284Q2VY69 593 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 TMEM176BQ3YBM2 270 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 CCDC153Q494R4 210 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ZCWPW2Q504Y3 356 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 PAPPA-AS1Q5QFB9 102 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 PIK3CD-AS1Q5SR53 167 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ASPHD1Q5U4P2 390 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 OR8G2PQ6IF36 304 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 FAM45BPQ6NSW5 357 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 ZNF836Q6ZNA1 936 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 CYS1Q717R9 158 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 MRPL52Q86TS9 123 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 PIGZQ86VD9 579 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 TRAPPC5Q8IUR0 188 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 NAXDQ8IW45 347 aa3.17□□□□□ -1.9
SF3B1-205ENST00000424674 RNF113BQ8IZP6 322 aaKnown RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 C2orf73Q8N5S3 287 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-205ENST00000424674 KIR3DL3Q8N743 410 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms