RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 DLX5P56178 289 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 IL10RAQ13651 578 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 NFATC4Q14934 902 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 NNATQ16517 81 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 C11orf88Q6PI97 169 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 PAQR7Q86WK9 346 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 PDZD9Q8IXQ8 264 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 DND1Q8IYX4 353 aaKnown RBP13.04□□□□□ -0.32
MSH5-206ENST00000423982 OR2AK2Q8NG84 335 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 OR51S1Q8NGJ8 323 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 WDR92Q96MX6 357 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 KLF15Q9UIH9 416 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 RABL2BQ9UNT1 228 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 SLC17A4Q9Y2C5 497 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 CABIN1Q9Y6J0 2220 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 TMEM72A0PK05 275 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 SNRPGP15A8MWD9 76 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 F5H5P2 479 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 DNASE2O00115 360 aaPredicted RBP13.04□□□□□ -0.32
MSH5-206ENST00000423982 BRINP1O60477 761 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 IL5P05113 134 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 DEFA5Q01523 94 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 ALG11Q2TAA5 492 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 POMGNT2Q8NAT1 580 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 LCN9Q8WX39 176 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 MIB2Q96AX9 1013 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 TCF7L1Q9HCS4 588 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 PRDM9Q9NQV7 894 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 MED9Q9NWA0 146 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 GPR179Q6PRD1 2367 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 A0A1W2PPC4 97 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 PRAMEF26H0Y7S4 382 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 PRKNO60260 465 aaPredicted RBP13.04□□□□□ -0.32
MSH5-206ENST00000423982 IGKV1D-16P01601 117 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 ACTR1BP42025 376 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 ACTR1AP61163 376 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 CDH26Q8IXH8 852 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 OR5M9Q8NGP3 310 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 TNFAIP8L1Q8WVP5 186 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 DNAJA3Q96EY1 480 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 SLC38A3Q99624 504 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 WDR13Q9H1Z4 485 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 MRTO4Q9UKD2 239 aaKnown RBP13.04□□□□□ -0.32
MSH5-206ENST00000423982 ENTPD2Q9Y5L3 495 aa13.04□□□□□ -0.32
MSH5-206ENST00000423982 D6RAR5 112 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 GLSO94925 669 aaPredicted RBP13.03□□□□□ -0.32
MSH5-206ENST00000423982 NDUFB2O95178 105 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 IGLV3-19P01714 112 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 LTBQ06643 244 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 B3GNTL1Q67FW5 361 aaPredicted RBP13.03□□□□□ -0.32
MSH5-206ENST00000423982 USP53Q70EK8 1073 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 DUSP19Q8WTR2 217 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 PATE1Q8WXA2 126 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 UTP23Q9BRU9 249 aaKnown RBP13.03□□□□□ -0.32
MSH5-206ENST00000423982 ZNF426Q9BUY5 554 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 MFFQ9GZY8 342 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 MED11Q9P086 117 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 FRRS1LQ9P0K9 344 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 TBC1D29Q9UFV1 150 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 ARHGEF17Q96PE2 2063 aaPredicted RBP13.03□□□□□ -0.32
MSH5-206ENST00000423982 WDFY3Q8IZQ1 3526 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 UBE2QL1A1L167 161 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 H7C1C5 153 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 CTNSO60931 367 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 GPANK1O95872 356 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 HPP00738 406 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 SLC35G6P0C7Q6 338 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 TSFMP43897 325 aaKnown RBP13.03□□□□□ -0.32
MSH5-206ENST00000423982 LCN6P62502 163 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 GGTLC2Q14390 218 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 BEX5Q5H9J7 111 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 ELP2Q6IA86 826 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 CDRT4Q8N9R6 151 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 CMTM3Q96MX0 182 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 OR2M4Q96R27 311 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 NPAS1Q99742 590 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 DNAJB12Q9NXW2 375 aaKnown RBP13.03□□□□□ -0.32
MSH5-206ENST00000423982 SLC22A7Q9Y694 548 aa13.03□□□□□ -0.32
MSH5-206ENST00000423982 TVP23AA6NH52 213 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 HMSDA8MTL9 139 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 DCTN6O00399 190 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 RAD1O60671 282 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 ITGA10O75578 1167 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 CSNK1EP49674 416 aaKnown RBP13.02□□□□□ -0.32
MSH5-206ENST00000423982 PGDP52209 483 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 C4orf46Q504U0 113 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 LIPNQ5VXI9 398 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 OR51D1Q8NGF3 324 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 EDAQ92838 391 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 LRRC46Q96FV0 321 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 SPACA7Q96KW9 195 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 RAB11FIP5Q9BXF6 653 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 SAV1Q9H4B6 383 aaPredicted RBP13.02□□□□□ -0.32
MSH5-206ENST00000423982 DUSP22Q9NRW4 184 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 STARD5Q9NSY2 213 aa13.02□□□□□ -0.32
MSH5-206ENST00000423982 RABL2AQ9UBK7 228 aaPredicted RBP13.02□□□□□ -0.32
MSH5-206ENST00000423982 FBXO9Q9UK97 447 aaPredicted RBP13.02□□□□□ -0.32
MSH5-206ENST00000423982 HRKO00198 91 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms